| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0546 |
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| Symbol | |
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| ID | 9137224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 682757 |
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| End bp | 684046 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003628593 |
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| Protein GI | 296120815 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.289005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGTT CACAAAATGC TGCTGATTAT CGCGTGACTT CCGGGGAATG GCATCTGGCG
GTCGAACGCG TGGCCCGCGA GAGCTATGGC CGGCTGATTG CCATCATCTG TCGGAAGACG
AATGACCTGG CCGCTGCAGA AGATGCCCTG GCGAGCGCTC TGCTGACCGC ACTGGAAACG
TGGCCACACA GCGGGTTACC AGTCGATCCT GAAGCATGGC TGATTCGAGT CGCGCAGCGG
AAATGGCTCG ATGAGACCAG GCATACGCAA CTGCGAGATC GTGTGCTCCG CGAAGTCATC
AGCCCGGTCA TGGCTCTCCT GCAGGAGAAA TCGGCAATGC ACTCGACCGA AGTTCCTCTG
CAGGATGATC GGCTGGCCAT GATGTTTGCC TGCGCTCATC CCGCGATCGA ACCTTCGATG
AGAACGCCAC TCATTTTGCA GGCCGTTCTG GGAATCGATG CGAGCCGAAT TGCTTCGGCG
TTTCTGATCA ATCCGCAGAC GATGAGTCAG CGTCTCGTCC GGGTAAAAAA CAAACTGAAA
GTGGCAAAAA TTCCCTTTGA ATTGCCACCT GAGCACGAAT GGCGGGATCG ACTGGATGAT
GTTCTCAGTG CCATCTATGC GGCCTACGGA ACGGCCTTCG ATGAAACGAT GTCTGGTCAG
TCTGGTACCC GAGCTCTCGC CAGAGAAGCC ATCTGGCTGG CACAAGTGGT TCAAAAAATA
TTACCTCAAT CTGCCGAAGC GGCAGGGCTG TATGCACTCC TGCTCTTCTG TGAGGCGCGG
CGTGACGCCA GGCGTGGAAG CGAAGACCAG TATGTTCCGC TGCTCGAACA ATCGCCGGAA
CTCTGGGACG GGGCAATGCT CGATGAAGCC GAAGCCACTC TAAGTGCCGC TTTTCAACAA
CAAGCCCCGG GTCGATTTCA ATGGGAAGCG GCGATTCAAT CGGCCCATTG TGCCCGGCGG
CACTTTACTT CGGGGCAGGC GGTTGTGGAC TGGCCAGCGA TTGCCGTGCT CTATGAGGGA
TTGCTGAGCT TTGCACCCTC TCTGGGTGCG AGAGTGGCTC AAGTCGGGGC TTTACTGCAA
GCGAACCAGA TGGAACAGGC GAAGGAACGA TTCGCTCTGA TTCCGCGCGA GGCATGCAGA
ACTTATCAGC CCTGGTGGGT GGTTTCAGCG GAACTCGCTC GACGGCAAGG CCAAAACAGT
CAGGCCCACA GTGATCTCAT GATCGCCATG GGCCTGACGG AAGATGCCGC AGTGAAAGAT
TTTCTGGCCA GGAAGGCCGC CAATCTCTAA
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| Protein sequence | MSGSQNAADY RVTSGEWHLA VERVARESYG RLIAIICRKT NDLAAAEDAL ASALLTALET
WPHSGLPVDP EAWLIRVAQR KWLDETRHTQ LRDRVLREVI SPVMALLQEK SAMHSTEVPL
QDDRLAMMFA CAHPAIEPSM RTPLILQAVL GIDASRIASA FLINPQTMSQ RLVRVKNKLK
VAKIPFELPP EHEWRDRLDD VLSAIYAAYG TAFDETMSGQ SGTRALAREA IWLAQVVQKI
LPQSAEAAGL YALLLFCEAR RDARRGSEDQ YVPLLEQSPE LWDGAMLDEA EATLSAAFQQ
QAPGRFQWEA AIQSAHCARR HFTSGQAVVD WPAIAVLYEG LLSFAPSLGA RVAQVGALLQ
ANQMEQAKER FALIPREACR TYQPWWVVSA ELARRQGQNS QAHSDLMIAM GLTEDAAVKD
FLARKAANL
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