| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0537 |
|---|
| Symbol | |
|---|
| ID | 9137215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 674211 |
|---|
| End bp | 675509 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | AAA ATPase central domain protein |
|---|
| Protein accession | YP_003628584 |
|---|
| Protein GI | 296120806 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTCT TTGCCAGTAT TGAGGCGTCG CATCTTGAGG ATGCCAAGCC ACTCGCTGCC
CGGATGCGTC CACGGAACCT CAACGAGTTC ATCGGGCAGT CACATGTCCT GGGAGAAGGG
ACGCTCCTCC GGCGAATGTT GATTGCCGAT CGCATTCATT CTGTCGTCTT CTATGGCCCG
CCCGGCGTCG GAAAGACAAC TCTCGCTGAA CTCATCGCCA AAAGCTCAAA GCGGCGATTC
ATCGCACTCA ATGCCGCTGC CACCGGTGTC AAGGAACTGC GAGAAGCTCT TGATGAATCC
CGCGAGCGGC TCAAATCGAG CGGCACGAAA ACACTGCTCT TTGTCGACGA ACTGCATCAT
TTCAACAAGC AGCAACAGAA TGTGCTGTTG CCCGATGTCG AACAGGGAGT TGTCTCCTTA
GTGGCTGCCA CGACGGCCAA TCCCTTCTTC GCACTGATTG CTCCGCTTCT CAGCCGTAGC
CAGATCTTTG AATTGAAGCC GCTCTCTACG GAAGAAATCA AAGCCGTTCT ACGTCAGGCT
TTATCCGATG AGACGCGAGG TTACGGCCAG AAAAACCTGA AAGTTCCCGA AGAAGTCTTT
GATTTCCTGG CAGCCAGTAG CGATGGCGAC GCACGCAGGG CGCTTTTAGC TCTCGAAATC
GCTGTCGAAT CGTTAGATTC CCGGGTTCTG GAACTCACCC TCGAAATCGC ACAGGAATCG
CTGCAAAAGA AGGCCATTCG TTACGACAAA AGTGGTGATG ATCACTACGA CGTCATCAGT
GCGTTTATCA AGAGCATGCG TGGCAGTGAT GCCGATGCGA CAATTTACTG GCTGGCCCGC
ATGTTGGAAG CTGGAGAAGA GCCCCGCTTT ATTGCCCGCC GGATTGTGAT TGCCGCCAGT
GAAGATGTGG GCATGGCCGA TCCTCAGGCA CTGGTTGTCG CGATGGCTGC CGCTCAGGCA
CTCGAGATGA TCGGCATGCC AGAAGGCCGA ATTCCTTTAG CACAAGCGGC GATCTATGTC
GCCACGGCTC CAAAATCGAA CGCCTCTTAC AATGCGATCA ACCAGGCACT GAGCGACATT
CAGAAACAAT ACATTCTGCC AGTCCCGAAT CATTTGCGGG ATGGCCACTA TCCCGGTGCT
AAACGCCTGG GCCATGGTGA AGGTTACCAG TATCCTCACG ATGCCCCAGA CGGCTGGGTC
AAGCAGGATT ACCTGACGGA GCCTCGAAGC TATTACACAC CCACGGATCG CGGCTATGAA
CAGGAGGTTT CTCGCCGTCG GCAACGGCAA GGCGACTAA
|
|---|
| Protein sequence | MSLFASIEAS HLEDAKPLAA RMRPRNLNEF IGQSHVLGEG TLLRRMLIAD RIHSVVFYGP
PGVGKTTLAE LIAKSSKRRF IALNAAATGV KELREALDES RERLKSSGTK TLLFVDELHH
FNKQQQNVLL PDVEQGVVSL VAATTANPFF ALIAPLLSRS QIFELKPLST EEIKAVLRQA
LSDETRGYGQ KNLKVPEEVF DFLAASSDGD ARRALLALEI AVESLDSRVL ELTLEIAQES
LQKKAIRYDK SGDDHYDVIS AFIKSMRGSD ADATIYWLAR MLEAGEEPRF IARRIVIAAS
EDVGMADPQA LVVAMAAAQA LEMIGMPEGR IPLAQAAIYV ATAPKSNASY NAINQALSDI
QKQYILPVPN HLRDGHYPGA KRLGHGEGYQ YPHDAPDGWV KQDYLTEPRS YYTPTDRGYE
QEVSRRRQRQ GD
|
|---|
| |