Gene Plim_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0516 
Symbol 
ID9137193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp642041 
End bp642808 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content52% 
IMG OID 
ProductPAS sensor protein 
Protein accessionYP_003628563 
Protein GI296120785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCACG ATGCCGGCCA ATTCCAAAAA GCATTTTTCA GTTGCCAGCC TTTGGCCGAG 
TCGCTCATGA GCCTGTTCGA CTCGATGCCT CAGACCTACT TTTACGCCAA AGATCGAAAC 
AGCCGGTTTG TCAAAGTCAA TCATCTCTTC TTGGAGAAAC ATGGACTCTC TCGCGAGTCT 
GAGGCGATTG GTCGATCCGA CTTCGACTTT CATCCACCGG TCATGGCTGA GGCCTACATT 
GCTGAAGACC AGCGCGTCAT GGAGAGTCGT AAACCGTTAG GTGGCCAGCT CTGGCAAGTC 
ATTCACAGGC GCGTTTCGAT TCGCTGGTAC GTTTCCACGA AAACCCCTTT GTTCGATTTG 
TCAGGAGAAG TCATCGGGCT GGCGGGAGCG ATGTACGAGG TAGCAGAACC CGAGCAGAAG 
ACGCATCATT TTCAAGAGCT GCTTCCGGTG ATTAACTACG TCGAAGAGCA TTATGCAGAA 
ACCATCGTGA TGGCGGATAT GGCGAAGCTC GCAGGCTTGT CCAGCACGCA TTTCAATCGA 
CGTTTTCAAG AGCTGTTGCG AATGACTCCA ACACAGTATC TTCGACAGGT GCGGATACAG 
ACCGCACGCC AACTCCTGAC CTTCACCTCT CGATCATTAG CTGATATCGC TGCTGATACA 
GGCTTTACCG ACCAAAGCCA CTTTACGAAA CGCTTCCGCG AATCAACGGG GCTGACTCCA 
GAGGCCTATC GCAAGAAATT TCTCAGCCGG CAGGGGACAG GTCGATAA
 
Protein sequence
MDHDAGQFQK AFFSCQPLAE SLMSLFDSMP QTYFYAKDRN SRFVKVNHLF LEKHGLSRES 
EAIGRSDFDF HPPVMAEAYI AEDQRVMESR KPLGGQLWQV IHRRVSIRWY VSTKTPLFDL 
SGEVIGLAGA MYEVAEPEQK THHFQELLPV INYVEEHYAE TIVMADMAKL AGLSSTHFNR 
RFQELLRMTP TQYLRQVRIQ TARQLLTFTS RSLADIAADT GFTDQSHFTK RFRESTGLTP 
EAYRKKFLSR QGTGR