Gene Plim_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0503 
Symbol 
ID9137168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp622022 
End bp622729 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628550 
Protein GI296120772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACCAC TCTCTGAAGC ACTGACTGGC CTCATGGGTG GACTGGGGCT TTCGGCGGCC 
AGTGGTTTAA ATACCTACGT TTCTTTAATC ACGCTGGGGC TAGCACATCG AAGTGGCTGG 
ATTACGTTAG CTGCACCCTA TGACTGGCTT GGCAATGAAT ATCTGCTGAT TGCGATCACC 
ATTTTAGGGC TGATCGATTT GATCGGGGAT AAGATTCCTG CCGTTGACCA CGCTCTGCAC 
ACGGTCGGCA TGTTTCTGGC TCCCATCGCC AGCGCCATTC TGTTTGCCAG CCAGACATCC 
TCCGTCATCC AGATTCACCC TGTGATTCTC CTCGCTGCTG GTTGCCTCGT AGGGAGTACC 
GTCCATCTTT CCCGCTCAGC GATCAGACCA GCAGTGAACG TAGCCACGGC TGGAACTGGA 
ACCACTGTCG TTTCGGTGAT TGAAGACCTC ATCGCATTAC TGCTTTCGAT ACTGGCAGTG 
GTACTTCCGA TTCTGGCCGG AATGATTGCG ATCGTGTTGC TCGTCATGAT GAGCTGGTTA 
TTTTTTCGCG TACTGGGCTA TGCAAAAGTT CGACTTCGGC AGCGATGGCT TCGCCAAACA 
GGCGATGCTG CCATTCACGG TGACGAACCT CGTCGAGACC AAGTTTCTGA CATCCCTCAG 
CCAGCAGATC AGGACGGACA AAAATTGCCG CCGGAGTTGC ATGACTGA
 
Protein sequence
MPPLSEALTG LMGGLGLSAA SGLNTYVSLI TLGLAHRSGW ITLAAPYDWL GNEYLLIAIT 
ILGLIDLIGD KIPAVDHALH TVGMFLAPIA SAILFASQTS SVIQIHPVIL LAAGCLVGST 
VHLSRSAIRP AVNVATAGTG TTVVSVIEDL IALLLSILAV VLPILAGMIA IVLLVMMSWL 
FFRVLGYAKV RLRQRWLRQT GDAAIHGDEP RRDQVSDIPQ PADQDGQKLP PELHD