| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0496 |
|---|
| Symbol | |
|---|
| ID | 9137161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 615058 |
|---|
| End bp | 616428 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | preprotein translocase, SecY subunit |
|---|
| Protein accession | YP_003628544 |
|---|
| Protein GI | 296120766 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.437531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTCAC AACTCGCCAT GATTTTTCGC ATTCCTGAGT TGCGGCAGAA GATCCTGTTG
ACGCTCGTTT TGCTAGCCGT CTATCGCATG GGCGGCTTAA TTCCTTTGCC ATTTATCGAT
CAGATGAAAC TGGCTGAGAC GCTTCAGTCG CAAGGCAGCG ACGGCATGGG GCGGGTGATG
AGTATGATCT CCCTTTTCTC GGGTACGAGT ATCGGGATGA GTACAATCTT CGGCCTGGGG
ATCATGCCGT ACATTTCGGC CTCGATCATA TTTCAGCTGC TCGGTACGGT TTATCCACCT
TTGGAAAAGC TCCAGAAGGA AGGTGAGGCC GGTCGCAAAA AGATCAATGA GTACACTCGT
ATTGCGACAG TTTTTATCGC CTTCGGACAG AGTTTTTTCT GGATCAGACA ACTTGCCGTT
TCTGGCGGGA TCATGGGAAA TGAAGGAAGT CTTTTGATTG CCGCTTACAG TGGTGTCTTC
TTCCAGTTGA TCTGTACTTT GACGATGACT GCCGGAACGT TGCTCCTGAT GTGGATTGGT
GAGCAGATTG ATGAGTATGG CATCGGCAAC GGCATCAGTC TGATCATTAT GGCTGGTATT
CTGGCTCGTA TGCCCCAAGC TGGCCAGGCA TTGCTCGAAC CCGCTTTTCA GAATGGCGTT
AAGCTCGGCA GTCAGACCGG TATCGAAAAG TTTCTGCTCC TGGGAATTCT CTTCGTCGGC
GTGATCGTTG GTGTCGTGGC GATCACACAG GCTCAAAGAA AGATTCCTGT CCAGTCTGCG
AAGCATGTGC GTGGGCGATC CGTGGCTGGT GGACAGCGGT CGTATCTCCC ATTGAGGCTC
AATCAATCGG GTGTGATGCC GATTATCTTC GCATCGAGCC TTCTGCTCTT CCCGATGTTT
TTGTTCCAGA TTCTCTCTCA GTTTTTCCCG ACCGTTGGTT TCTTCCGTCT GGCTGAGGCC
ACCATGCAGA ACCACGGTGG ATTTATCTAC AACATTCTGT ACATCGGTCT GATTTACTTT
TTCTGTTACT TCTGGACCGC CATTACATTC AACCCGAAAG ACATGGCCAA TAATCTGAAG
GACTACGGCA GCTTTATCCC AGGCTACCGG CCTGGCGGGC GGACTGCAGC TTATCTGGAG
GCTGTGATGG TTCGCGTGAC ATTTGTGGGT GCAGCGTTCC TGAGTCTGAT TTCGATCATC
CCGACTGTGA TCTCGAATGC TCTGGGAATT GATCCACTGG TCGCGAGTTT CTATGGCGGA
ACAGGTTTGC TGATCTGTGT TTCAGTGGCG CTCGACCTGG TCCAGAAAAT TGACAGTCAC
CTCGTGATGA GAAACTACCG CGGTCTTCTG GAGTCTGATA ACGCTGCTTG A
|
|---|
| Protein sequence | MFSQLAMIFR IPELRQKILL TLVLLAVYRM GGLIPLPFID QMKLAETLQS QGSDGMGRVM
SMISLFSGTS IGMSTIFGLG IMPYISASII FQLLGTVYPP LEKLQKEGEA GRKKINEYTR
IATVFIAFGQ SFFWIRQLAV SGGIMGNEGS LLIAAYSGVF FQLICTLTMT AGTLLLMWIG
EQIDEYGIGN GISLIIMAGI LARMPQAGQA LLEPAFQNGV KLGSQTGIEK FLLLGILFVG
VIVGVVAITQ AQRKIPVQSA KHVRGRSVAG GQRSYLPLRL NQSGVMPIIF ASSLLLFPMF
LFQILSQFFP TVGFFRLAEA TMQNHGGFIY NILYIGLIYF FCYFWTAITF NPKDMANNLK
DYGSFIPGYR PGGRTAAYLE AVMVRVTFVG AAFLSLISII PTVISNALGI DPLVASFYGG
TGLLICVSVA LDLVQKIDSH LVMRNYRGLL ESDNAA
|
|---|
| |