| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0472 |
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| Symbol | |
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| ID | 9137137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 597053 |
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| End bp | 601336 |
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| Gene Length | 4284 bp |
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| Protein Length | 1427 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_003628520 |
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| Protein GI | 296120742 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACCG GCGAAACATC GTACGATCGC GTCAATGAGT TTTCCTCGAT TAAGATCAAT
CTGGCCAGCC CTCACGATAT CCGGAGCTGG TCCTTCGGTG AGGTGAAAAA GCCGGAGACT
ATCAACTACC GAACATATCG TCCCGAGAGG GATGGTTTGT TCTGTGAGCG TATTTTCGGT
CCAGAAAAAG ACTGGGAATG CGCCTGCGGT AAGTACCGCG GCATGAAGTA CAAGGGGATG
ATCTGCGACC GTTGCGGCGT TAAAGTCACG CATAGTCGTG TTCGCCGTAA GCGCATGGGG
CACATTGAGT TAGCTGCCCC GGTCGTGCAT ATCTGGTTCT TCAAGAGTAT GCCCAGTCGC
CTGGGCGCTC TGCTGAGTGT GAAGACGACG TCACTGGAGA AAGTGATCTA CTTCCAGGAC
TACCTGGTGA TTGATCCGGG TGACACGACT CTGAAGAGGG GTCAGTTGCT CACAGAAGAA
GAATATCGTC AGGCCAAAAC CAAGTTCGGC GAAGGCAGCT TCGACGCCGA CATGGGTGCG
GATGCTATCA AGAAGATGCT GCTCGATCTG AATCTCGTCG AGATTTCTCA GCAGCTTCGC
GTTGAGCTCA AGAAGACGAA CAGCCAGCAG AAGAAAAAAG AGCTGATCAA GCGTCTGAAG
ATTGTGGAGT CCCTCCGCGA CAGCGATAAC CGCCCTGAGT GGATGGTGCT CGACTGTGTG
CCAGTGATTC CACCTGATCT GCGGCCACTG GTGCTGCTCG ATTCTGGCAA CTTCGCGACG
AGCGATCTGA ACGACCTCTA CCGCCGCATT ATCAATCGAA ACAATCGGTT GAAAAAACTG
GTCGATTTGA ATGCTCCTGA AGTCATCGTG CGCAACGAGA AGCGCATGTT GCAGCAGTCG
GTCGATGCGT TGTTTGATAA CAATCGCTGC AAGCGGCCAG TGCTTGGCTC GTCGAATCGT
CCGCTCAAAT CCTTGACAGA TATGATCAAG GGGAAGCAGG GTCGTTTCCG CGAGAACCTG
TTGGGTAAGC GCGTTGACTA TTCGGCTCGT TCGGTGATTG TCGTCGGTCC AACCCTGAAG
CTGCACCAGT GTGGTTTGCC GAAGAAGATT GCTCTTGAGC TCTATCAGCC CTTCATCATC
CGTCGCCTCA AGGAACTCGG CCATGCCGAT ACCATTAAGT CGGCTAAGCG GATGCTGGAG
CGTCGCGACG AAGAGGTGTG GGATATTCTT GAAGAGGTGA TCACGAATCA CCCGGTGTTG
CTCAACCGCG CACCCACGCT GCACCGAATT GGTATTCAGG CGTTTGAACC ACAACTGGTG
GAAGGGAATG CGATTCGTAT TCACCCGCTG GTTTGCCGTG GTTTTAACGC TGACTTTGAC
GGTGACCAGA TGGCCGTCCA CCTGCCGCTC TCGATTGAGG CACAGGTTGA GGCTCATACG
CTGATGATGT CGACACACAA CATCTTCAGC CCGTCGAACG GGGCGCCGAT CATCAGTCCG
TCACAGGACA TTGTGATGGG TTGCTACTAT GTGACGATGA AGAAGCCAGG CCTGATTGGC
GACGGCATGA CATTCTCTTC GACGCAGGAA GTCTACACAG CCTTCCAGCA TGGCAAGGTG
CGCCTGCATA CTTCGATCCG CGTTCGCCTG CCGAAAGACA AGCGAGTGAA GGGAGAAGGG
GCTGACACCT ACAAGAAGGG TGGCCTGGTT GAGACGAGCG TCGGGCGAGT GGTCTTTAAC
GATATGATCT CGCCAAAGAT GGCTTTCTAT AACTACACCA TGAAAGGTCG CGACCTGGCA
GGTGTGATTT CCGACTGCTA TCTCGAAATG GGTCGTCGCG AAACGATTGC TCTGCTGGAT
CGCATGAAGG AAACTGGTTT CCGCGAATCA ACTCGCTCGG GCCTTTCTTT TGCCGCCAGC
GATCTGAAGA CACCACCCAA TAAGGACAAG GTGATTTCGG AAGCCGAAGC TCACGTTCTC
AAGTTCCAGA AGAACTATGA GAAGGGTGTG ATTACGGCGA AAGAGCGCTA TGAACAGACG
CTGGACCGCT GGACTCAGGC TCGCGAAGCG ATCACCGTTT CTATGATGGA CGAGTTCAAG
AACGACGTTC GCGATGAAGG TCGTTATGTG AATCCGATCT TCCTCATGGC AGATTCGGGT
GCACGCGGTG GCGTCGAACA GATTCGGCAG TTGGCCGGTA TGCGTGGTTT GATGGCTAAG
CCAAGTGGCG AAATCATCGA AACACCGATT AAGGCCAACT TCCGCGAAGG CCTGACAGTG
CTGGAGTATT TCAGCTCGAC ACACGGTGCT CGTAAAGGTC TGGCTGATAC TGCACTCAAG
ACAGCCGATT CGGGATACCT GACTCGTAAG CTGGCGGATA TCTGTCAGAA CCTCGTCATC
ACCATGCGTG ATTGCGGCAC CACCAAGGGG ATTACCCGCG GTGTGATTTA CCGTGGCGAG
AAGGTCGAAG TCGGTCTCGC TGACGCCATT CGTGGACGAG TCAGCCGGAC GAATATCGTC
AATCCTGTGA CAGATGAAGT GGTTGTTCGT GAGGATGAAC TGATCACAAT CGAGATTGCC
CGCAAGATTG AGGCGATGGG CCTGGAGAAA ATCCAGGTGC GCAGCCCCAT GACCTGTGAG
GCAGGCCTCG GGATCTGTCA GCTTTGCTAT GGGATGGATC TCTCCACAGG TGCACTGGTT
GAAGAAGGTC TGGCAGTCGG AACGATTGCT GCCCAGTCGA TTGGTGAGCC TGGAACCCAG
TTGACGATGC GTACCTTCCA CGTGGGTGGA ACGGCATCTC GTGACGTGGA AGACAGCGAA
ATCAAGTGCC GCAAGGGTGG TCGAGTTCGC TTTGCCCGCG TTCGCAGCGT TGTCAATGCG
GATGGTAAAG CCGTGGTGCT GGGGCGCAAT GGTGAAGTCA CCGTTGTGGA CAGCAAAGAT
CGTGAACTCG AGAAGTACAC GATTCCGAAC GGGGCGACTC TGCAGGTTGC CGAAAACGAA
GTCATTGAAG CGGGCCAGAT TCTCTGCTCG TGGGATCCTC ACTCAGTACC GATCCTCTGC
GAAGTGGGTG GTAAGGTGCG GTTCGAAGAT TTGATCGAGG GTCAGACTGT TCGCTCTGAA
ACCGATCGCA TGGGTAACAT TCGTAAGACG ATCATCGAAC ATAAGGGTGA TCGTCATCCG
CAGATTGTGC TGGAAGACAG TGCTGGTAAA ATTCTGGACT TCTACTACCT GCCTGAAAGG
GCGACAGTGG AAGTTCTCGA AGGCCAGCAA GTGGCCGCCG GTTCGATTCT GGCGAAGAAC
CCCCGCGAAT CGATGGGTAC GCAGGACATC ACCGGTGGTC TGCCCCGAGT TACTGAACTA
TTCGAAGCCC GTAAGCCTAA AGAACCTGCC ATTATCTCTG AGATTGATGG CGAAGTAGAA
CTGGTGGCTG AGAAGAAACG CGGCAAGCGA ATCATCAAGG TCAAGGGTGT TGACGGGACC
GAACGTGAAC ACATTATTCC CCATGGTAAG CAACTGCTGG TTCACTCAGG TGAGCAGGTG
AAAGCCGGGG ATGCCCTTGT TCGCGGACCA CTGGTGCCTC ACGACATTCT GGCAGTCAGT
GGCGAAGAAG CAGTCCATGC CTATTTGCTG CATGAAATCC AGAACGTATA CCGCTCACAG
CGTGTGGTCA TCGACGACAA GCACATTGAA TTGGTCGTTG CCCAGATGCT GCGAAAGGTT
CGTGTGGATG ATGTCGGTGA TACGACATTG CTGCCAGGCG TGCTGATTGA CCGGTTTGAA
TTCCGCAAGA TTAATCAGAA GCTTCAGCAG TGTGGCCGAG TGACCGATCC TGGTGACTCA
GAATTCCATA AGGACGACAT TGTCCCGCTG GAAACGATTG CTCAAGTGAA CGAAGAAATT
GAAGCTTCCG GCGGGCAGCC GATTGCGACG GCCAAGCCAC GACCAGCGTC TGCCAGTACA
CAATTGCTGG GGATTACGAA GGCCGCTGTG CAGAGCGAAA GCTTCCTGTC GGCAGCCAGT
TTCCAGGAAA CGACCAAGGT GCTCACGGAG GCTGCCATCG CCGGTAAGTC CGATTACCTT
GTGGGTTTGA AGGAAAACGT GATTCTTGGC CACCTGATTC CCGCAGGAAC TGGCTTCAAG
CTTCATCAGA AGTCTGAGGT TCGAATTCGG CCGGAAGCTC TCGCGGAGTT GACTGCCGAA
AGAGACAGGA TTCTGGCCGC CCGGGCAAAC TTGCTCAACG AACCAGAGAT TTCGCCCAAC
AGTGGGCTGG GGCGTCTCGA ATAA
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| Protein sequence | MSTGETSYDR VNEFSSIKIN LASPHDIRSW SFGEVKKPET INYRTYRPER DGLFCERIFG
PEKDWECACG KYRGMKYKGM ICDRCGVKVT HSRVRRKRMG HIELAAPVVH IWFFKSMPSR
LGALLSVKTT SLEKVIYFQD YLVIDPGDTT LKRGQLLTEE EYRQAKTKFG EGSFDADMGA
DAIKKMLLDL NLVEISQQLR VELKKTNSQQ KKKELIKRLK IVESLRDSDN RPEWMVLDCV
PVIPPDLRPL VLLDSGNFAT SDLNDLYRRI INRNNRLKKL VDLNAPEVIV RNEKRMLQQS
VDALFDNNRC KRPVLGSSNR PLKSLTDMIK GKQGRFRENL LGKRVDYSAR SVIVVGPTLK
LHQCGLPKKI ALELYQPFII RRLKELGHAD TIKSAKRMLE RRDEEVWDIL EEVITNHPVL
LNRAPTLHRI GIQAFEPQLV EGNAIRIHPL VCRGFNADFD GDQMAVHLPL SIEAQVEAHT
LMMSTHNIFS PSNGAPIISP SQDIVMGCYY VTMKKPGLIG DGMTFSSTQE VYTAFQHGKV
RLHTSIRVRL PKDKRVKGEG ADTYKKGGLV ETSVGRVVFN DMISPKMAFY NYTMKGRDLA
GVISDCYLEM GRRETIALLD RMKETGFRES TRSGLSFAAS DLKTPPNKDK VISEAEAHVL
KFQKNYEKGV ITAKERYEQT LDRWTQAREA ITVSMMDEFK NDVRDEGRYV NPIFLMADSG
ARGGVEQIRQ LAGMRGLMAK PSGEIIETPI KANFREGLTV LEYFSSTHGA RKGLADTALK
TADSGYLTRK LADICQNLVI TMRDCGTTKG ITRGVIYRGE KVEVGLADAI RGRVSRTNIV
NPVTDEVVVR EDELITIEIA RKIEAMGLEK IQVRSPMTCE AGLGICQLCY GMDLSTGALV
EEGLAVGTIA AQSIGEPGTQ LTMRTFHVGG TASRDVEDSE IKCRKGGRVR FARVRSVVNA
DGKAVVLGRN GEVTVVDSKD RELEKYTIPN GATLQVAENE VIEAGQILCS WDPHSVPILC
EVGGKVRFED LIEGQTVRSE TDRMGNIRKT IIEHKGDRHP QIVLEDSAGK ILDFYYLPER
ATVEVLEGQQ VAAGSILAKN PRESMGTQDI TGGLPRVTEL FEARKPKEPA IISEIDGEVE
LVAEKKRGKR IIKVKGVDGT EREHIIPHGK QLLVHSGEQV KAGDALVRGP LVPHDILAVS
GEEAVHAYLL HEIQNVYRSQ RVVIDDKHIE LVVAQMLRKV RVDDVGDTTL LPGVLIDRFE
FRKINQKLQQ CGRVTDPGDS EFHKDDIVPL ETIAQVNEEI EASGGQPIAT AKPRPASAST
QLLGITKAAV QSESFLSAAS FQETTKVLTE AAIAGKSDYL VGLKENVILG HLIPAGTGFK
LHQKSEVRIR PEALAELTAE RDRILAARAN LLNEPEISPN SGLGRLE
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