Gene Plim_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0469 
Symbol 
ID9137134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp593386 
End bp594546 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF214 
Protein accessionYP_003628517 
Protein GI296120739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGG TGGCTTGGAA AATGCTCAAT GGCGATCCCG TGAAATACCT CGGGACCGTC 
TTTGGTGTGG GCTTCGGAGT TCTCCTGATT GCCCAGCAAT GCTCGATCTT TGTGGGCATT
ATTCTCCGCA CGGCAAATCC AATTGCTGAT GTTCGAGAAG CTCAGATCTG GGTCATGGAT
CCATATCTGC AGAATGCCGA CGAAATTAAG CCCCTTTCTG ATAGCGATCT CTATCGGATC
CGTGGCGTGG AAGGAGTGGA TTGGGCGGTC AAAATCTATA AAGGACTGGC TCGAGCTAAA
ATCGAAACGG GAAACTTTCG CCAGGTGATT CTGATGGGAG TTGATGATCA GTCGTTGATC
GGTGCTCCTG TCAAAATGAT TGAAGGAGAT ATTCGCGATC TCAAGCGGCC GGATGCCATC
GTGATGGATC AGTATGGATA CAAGTATCTA TGGCCGAACG AGCCTTTTCA GGTCGGTCGT
GAAGTCGAAA TGAATGATCG CCGGGCAGTG ATTGTCGGGA TTTGCGATGT TTCCGCACCA
TTTCAATCAT TCCCGGTTGT ATTCACGCGA TATTCACAGG CTGTTCAGTT TGTGGCCAGC
GAACGCCAGC AGTTGTCATT TGTCGTGGCG GCTCCCCGTC AAGGATATCA GGTTGATGAA
GTGTGTCGCC TGATAAATGA GCAAACTCGC TCAATTGGCG AGAAGTCCGG ATTGATTGCC
ATGCCGTATC GTGAGTTTGT CTGGATCAAT ATCAAATACT ATCTGGAGAA TACGGGGATC
CCGGTGAATT TCGGGATCAC GATCACCTTG GGTTTTATTG TCGGAACGGC GATTGCAGGA
CAGACATTCT ACTTATTTAC AATTGAGAAT CTGAAACAGT TTGGAGCGCT CAAAGCGATG
GGAGTCACAA ACTGGGGGAT CGTGGGCATG ATTTGCCTGC AGGCTTCTGT CGTGGGGGTG
ATTGGTCTTT CGATTGGTTT AGGATTGACG GCTCTTTTCT TTGTCGCGAC GACCAGGCTT
TTACCCGATT TGCGCGGTTT GCATCTGATG TGGGAAATTG CCGGGGGAAC GTGCCTGGCT
GTCACGTTAA TTATTTGCCT GGCAAGCGCA TTAAGTCTGC GAAAGGTGTT AACGCTCGAA
CCGGCCGTGG TTTTCCGATA A
 
Protein sequence
MNWVAWKMLN GDPVKYLGTV FGVGFGVLLI AQQCSIFVGI ILRTANPIAD VREAQIWVMD 
PYLQNADEIK PLSDSDLYRI RGVEGVDWAV KIYKGLARAK IETGNFRQVI LMGVDDQSLI
GAPVKMIEGD IRDLKRPDAI VMDQYGYKYL WPNEPFQVGR EVEMNDRRAV IVGICDVSAP
FQSFPVVFTR YSQAVQFVAS ERQQLSFVVA APRQGYQVDE VCRLINEQTR SIGEKSGLIA
MPYREFVWIN IKYYLENTGI PVNFGITITL GFIVGTAIAG QTFYLFTIEN LKQFGALKAM
GVTNWGIVGM ICLQASVVGV IGLSIGLGLT ALFFVATTRL LPDLRGLHLM WEIAGGTCLA
VTLIICLASA LSLRKVLTLE PAVVFR