| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0460 |
|---|
| Symbol | |
|---|
| ID | 9137125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 579278 |
|---|
| End bp | 579739 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function UPF0102 |
|---|
| Protein accession | YP_003628509 |
|---|
| Protein GI | 296120731 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCTGT GGATTTCTCG CTGGGGACTA CGTCTCTCTG CATGTCGATG GTGTGTCGCT
TTCTGGCAGA GATCTCCTCA TTCACCATCA TCTCACCGGA CTCTGAACAT CGGGGAGCAG
GGCGAAGCCA GAGCGGAGAA GTACTTGAAG GAGTTGGGAT ATCAGATTCT CGCCAGAAAT
CTACGCACCC GACTGGGTGA GATTGATCTT CTGGCACTCG AAGGCGAAAC GATTGTCTTC
ATCGAGGTGA AAACCCGTAA GTCGGATGCG CGCGGCCGAC CAGAAGAGGC GATTCATCCG
CGTAAACAAA AACAGCTGTC GAGAGTGGCG ATGGCGCTCT TGAAGTCGAA AGGGTGGTTG
CATCGACAAT CAAGAATCGA TGTCATCACA ATTACGGGAG AGCCAGAAAG CCCAGATTGT
GAGCTCAGGC ACTATCGCCA TGCCTTTCCT TCGGTACTCT GA
|
|---|
| Protein sequence | MKLWISRWGL RLSACRWCVA FWQRSPHSPS SHRTLNIGEQ GEARAEKYLK ELGYQILARN
LRTRLGEIDL LALEGETIVF IEVKTRKSDA RGRPEEAIHP RKQKQLSRVA MALLKSKGWL
HRQSRIDVIT ITGEPESPDC ELRHYRHAFP SVL
|
|---|
| |