Gene Plim_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0444 
Symbol 
ID9137108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp555433 
End bp556161 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628493 
Protein GI296120715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.149194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCACG AGAACACGAC GAATTCGACA GAAACGACTC CAGCAGCTTC GCGGCTGCGG 
TTTCGCTGGA TTCTGATTCT GGCAACGATC GTGGCCATGG GTGCTGGTGG CTGGGCTTAT 
CGTCAGAATC ATCGCTACAA GCATGTCGCG ATTCACGATC CCGGAAAAGT GATTCGCTGC 
GCCTGGGTGG AAGCCGACGT GATGGCCGAA CTCGTCCAGA AGCACCAGGT GAAGACGGTG 
CTCAATCTTT GCCGCCCGGG AGAAATGGGC CCGGATCGCG CACGGCAGGA GCGAATGGCT 
GTGGAAGCCG CCGGTGCCAA GCTGATTGAA CTTTCACTTC CGGATATTGA TGATCCTTCG 
AGCCCTCTGA TCGCTCCACA TATCGCAGTG TTAAAGGATC CCGCGAACTA TCCACTGATT 
GTTCATTGTC AGCATGGATT CAATCGAACA GGCCGCGTGT TAACGATGTA CGACGTAATG 
TTCCGTGGAA AAACAGGTGA AGAAGCTCTG TCGAAGATGC CTCTTTTCGG GCGCCACGAC 
TACGCACCAC TCGAGCATGC TTTCGCTCGA AACTTTGATG TCTTCTATGC TGCCGAAAAG 
GCCAAAGAAG CCGCTGGTGA AAAACCTGAC CAGTCCACTC CCTCTTTAAC GACTGAACAT 
GTCGAGACAG CAGTCCCTGC CATTGAGCAG ACCAGCTTCC AGGAGGGAAC TGGCAAACCG 
TCGCGTTGA
 
Protein sequence
MTHENTTNST ETTPAASRLR FRWILILATI VAMGAGGWAY RQNHRYKHVA IHDPGKVIRC 
AWVEADVMAE LVQKHQVKTV LNLCRPGEMG PDRARQERMA VEAAGAKLIE LSLPDIDDPS 
SPLIAPHIAV LKDPANYPLI VHCQHGFNRT GRVLTMYDVM FRGKTGEEAL SKMPLFGRHD 
YAPLEHAFAR NFDVFYAAEK AKEAAGEKPD QSTPSLTTEH VETAVPAIEQ TSFQEGTGKP 
SR