Gene Plim_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0440 
Symbol 
ID9137104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp548759 
End bp549466 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content56% 
IMG OID 
Productribosomal protein L1 
Protein accessionYP_003628489 
Protein GI296120711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACTG TTTCTAAGCG AATGAAGCAT CTCGGCGAAA TCGCCGGTAA GATTGGTGTG 
GTTGATCTGC CGGCAGCTGT TACATCTCTC AAGGGGATGG AGTCGAAGCT GCCCAAGGGT 
GTCAAGCCTT GCAAGTTTGA CCAGACGGTC ACCATCTCTG TCCGCCTTGG TGTCGATCCG 
CGTCAGGCTG ATCAGATCGT CCGCGGCTCG ATCGTTTTCC CTCACGGCAT TGGTAAATCG 
AAGCGCGTGC TGGTCTTCGC TCAGGGCGAC AACGTCAAGA TTGCTCAGGA CGCTGGTGCC 
GAGTTTGTCG GTGGCAAAGA GTTGGCCGAC AAGATTAAAG AAGGCTGGGT TGACTTTGAT 
GTCGCCATTG CCACGCCCGA CATGATGGGT GTCGTCGGTC CCCTTGGCCG GGTCCTCGGT 
CCTCGCGGTT TGATGCCCTC TCCCAGGGCT GGGACAGTGA CTGCTGACGT CGCGGCTGCC 
GTTAAAGAAT ACCGTGCTGG TAAAGTCGAG TTCCGCGTCG ATGATGGCGG CAACGTCCAT 
TGTGTAGTCG GCAAGATGAG CTTCGGCGAG CAACAGCTGA TTGAAAACGT GGAAGCGTTT 
TTGAAGTACA TTCGCTCACT CAAGCCCGCG ACCTCCAAGG GCCAGTACAT TCGTAATATT 
GTCATCGTCG GCAGCATGAC TCCCGCCGTC TATGTGACTG CAGTCTAG
 
Protein sequence
MATVSKRMKH LGEIAGKIGV VDLPAAVTSL KGMESKLPKG VKPCKFDQTV TISVRLGVDP 
RQADQIVRGS IVFPHGIGKS KRVLVFAQGD NVKIAQDAGA EFVGGKELAD KIKEGWVDFD 
VAIATPDMMG VVGPLGRVLG PRGLMPSPRA GTVTADVAAA VKEYRAGKVE FRVDDGGNVH 
CVVGKMSFGE QQLIENVEAF LKYIRSLKPA TSKGQYIRNI VIVGSMTPAV YVTAV