Gene Plim_0438 details

Gene Information

• Locus tag: Plim_0438
• ID: 9137102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 547576
• End bp: 548190
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 49%
• Product: transcription termination/antitermination factor NusG
• Protein accession: YP_003628487
• Protein GI: 296120709

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGTAG ATGGGAAAGC GACAGAAGGA GTCGCTGGGG GTGCTTCCTC CAGCAACTCA 
GAGGTTGCTT CGACCGAGAA CGCCATGCTC TGGTACGTTT TGAAGATTAC GAGCAATCGT 
GAGAAATCAA TTCGAGACAA TCTCCTGAGG CGAATTCGGC AGGAAGGCCT CGAGCAGTTT 
TTTGGTGAGA TTCTGATTCC CACTGAAAAG GTGGTAGAGA ATAAAAACGG TAAAAAGAAA 
GTTGTCGAGC ACAAGTTGTA CCCTGGATAC CTCATGGTTC AGATGATTCT GAACGATGAC 
ACCTGGTACA TTGTGAGAAC GACGGGTGGT GTGGGTGATT TCACTGGTTC TGCCGGTAAG 
CCGACACCGA TGCAGGATCA TGAGATAGCT CGTATGCTGC AGAAGCAGGA GCAGAAGCAG 
GAATCTGCTG CTCCTGCCAT GAAGATTGAG TTTGCTGTGG GTGATATTGT CAAGATCAAG 
GAAGGGACCT TCGAAGGTTT TGAAGGCCCG ATTGATTCGA TTGACGAAGC GAACGGCAAG 
ATTAACGTAC TAGTGGAAAT TTTTGGACGG TCAACACCTG TTGAGCTGGA GTACTGGCAG 
GCCGAAAGGC CGTAG 

 

Protein sequence

MAVDGKATEG VAGGASSSNS EVASTENAML WYVLKITSNR EKSIRDNLLR RIRQEGLEQF 
FGEILIPTEK VVENKNGKKK VVEHKLYPGY LMVQMILNDD TWYIVRTTGG VGDFTGSAGK 
PTPMQDHEIA RMLQKQEQKQ ESAAPAMKIE FAVGDIVKIK EGTFEGFEGP IDSIDEANGK 
INVLVEIFGR STPVELEYWQ AERP