Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0430 |
Symbol | |
ID | 9137089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 535262 |
End bp | 536506 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | exodeoxyribonuclease VII, large subunit |
Protein accession | YP_003628479 |
Protein GI | 296120701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.894229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGGGAA ACGACTTGCC CAAATTGACA GTTTCGCAGC TCTCGGATTG TCTCCGGGAA ATCGTGGAAA TGGCATTTCC GCGAGTAATC GTCACTGGAG AGATCTCAGG GTTAACCCGA GCCAGTTCCG GGCATGTTTA CTTCACACTC AAGGATGAAG CCTCGCAGAT CAAGGCGGTG ATGTGGCGAT CATCGGCCAT CAAGTTGAAG TTCGACCTCC GCGATGGTTT AGCCGTCGAA GCGATTGGAG GTGTCGAAGT CTATGCACCA CGTGGGCAAT ACCAGTTGAT GGTGGAGCGG CTGACGCCTC AGGGGATTGG GCCCCTTGAA CTGGCATTTC GTCAATTGCA TGCCAAGCTC GCGGCGGAGG GTTTGTTTGA TGTGGCAAGG AAGCGACCAC TGCCTCGCTT TCCCAAACGG ATTGCCGTGA TCACCAGTCC TGCCGGTGCG GCGGTGCATG ACATTCTGCA GATCCTTCTC AGACGCTGGC CCGGCGTGAA TGTGGTTGTA GTTCCCGTGC CTGTGCAGGG GCCAGAGGCA GCCCCAAAAA TTGCAGCGGC TTTAGGAATG GTCCATCGAC TGCCAGATGT GGATGTCGTG ATCTGCGGTC GCGGTGGGGG AAGCCTGGAA GACCTCTGGG CCTTTAATGA AGAGCTTGTG GCCAGGGCCA TTGCCCAATG CCGGATTCCC GTGATCAGTG CGGTGGGGCA TGAAACCGAT GTGACGATTG CCGATCTGGT CGCCGACCAA AGAGCATTGA CTCCCAGTGA AGCTGCCGAG CGTGTCATTC CGGTTAAGGC GGAGTGGGTT CAGCATCTCG ATCAGCTCCG TGATCGGCTC TGTTCCTCGC TAGTCGCGTT GACGAACAGT CGTCGCAAAG AACTTGAGCA ACTGAAGAAG CGAAGAGCGT TGGCGAAGCC ACTGGAACAG ATCCATCGTT TCTCGCGGGA GTTGGATGAT CTCGAAACTC GCCTTAAGCA AAGCTGGAAA AGAAAACTGG CCAGCCTGAA TGCAGAACTG GAGAGTGCGG GCCGGGCACT CCAGGCATTG AGTCCACTGG CAGTGCTGGA ACGTGGCTTT TCGATCAGCA AACGAGTACC CGGTGGTGAC CTGATTCAAT CCGTCAAGCA AGTGCAAGTG GGTGATCGAT TGGCAACTCT GGTGGCCGAT GGGCAGATTC TCAGCCAGGT TTTGCAAGTT GATGCGGACG ATGATCAGCA GGATCCTGCT TCGAGCGAAT CGTAG
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Protein sequence | MPGNDLPKLT VSQLSDCLRE IVEMAFPRVI VTGEISGLTR ASSGHVYFTL KDEASQIKAV MWRSSAIKLK FDLRDGLAVE AIGGVEVYAP RGQYQLMVER LTPQGIGPLE LAFRQLHAKL AAEGLFDVAR KRPLPRFPKR IAVITSPAGA AVHDILQILL RRWPGVNVVV VPVPVQGPEA APKIAAALGM VHRLPDVDVV ICGRGGGSLE DLWAFNEELV ARAIAQCRIP VISAVGHETD VTIADLVADQ RALTPSEAAE RVIPVKAEWV QHLDQLRDRL CSSLVALTNS RRKELEQLKK RRALAKPLEQ IHRFSRELDD LETRLKQSWK RKLASLNAEL ESAGRALQAL SPLAVLERGF SISKRVPGGD LIQSVKQVQV GDRLATLVAD GQILSQVLQV DADDDQQDPA SSES
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