Gene Plim_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0430 
Symbol 
ID9137089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp535262 
End bp536506 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content56% 
IMG OID 
Productexodeoxyribonuclease VII, large subunit 
Protein accessionYP_003628479 
Protein GI296120701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.894229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGGGAA ACGACTTGCC CAAATTGACA GTTTCGCAGC TCTCGGATTG TCTCCGGGAA 
ATCGTGGAAA TGGCATTTCC GCGAGTAATC GTCACTGGAG AGATCTCAGG GTTAACCCGA
GCCAGTTCCG GGCATGTTTA CTTCACACTC AAGGATGAAG CCTCGCAGAT CAAGGCGGTG
ATGTGGCGAT CATCGGCCAT CAAGTTGAAG TTCGACCTCC GCGATGGTTT AGCCGTCGAA
GCGATTGGAG GTGTCGAAGT CTATGCACCA CGTGGGCAAT ACCAGTTGAT GGTGGAGCGG
CTGACGCCTC AGGGGATTGG GCCCCTTGAA CTGGCATTTC GTCAATTGCA TGCCAAGCTC
GCGGCGGAGG GTTTGTTTGA TGTGGCAAGG AAGCGACCAC TGCCTCGCTT TCCCAAACGG
ATTGCCGTGA TCACCAGTCC TGCCGGTGCG GCGGTGCATG ACATTCTGCA GATCCTTCTC
AGACGCTGGC CCGGCGTGAA TGTGGTTGTA GTTCCCGTGC CTGTGCAGGG GCCAGAGGCA
GCCCCAAAAA TTGCAGCGGC TTTAGGAATG GTCCATCGAC TGCCAGATGT GGATGTCGTG
ATCTGCGGTC GCGGTGGGGG AAGCCTGGAA GACCTCTGGG CCTTTAATGA AGAGCTTGTG
GCCAGGGCCA TTGCCCAATG CCGGATTCCC GTGATCAGTG CGGTGGGGCA TGAAACCGAT
GTGACGATTG CCGATCTGGT CGCCGACCAA AGAGCATTGA CTCCCAGTGA AGCTGCCGAG
CGTGTCATTC CGGTTAAGGC GGAGTGGGTT CAGCATCTCG ATCAGCTCCG TGATCGGCTC
TGTTCCTCGC TAGTCGCGTT GACGAACAGT CGTCGCAAAG AACTTGAGCA ACTGAAGAAG
CGAAGAGCGT TGGCGAAGCC ACTGGAACAG ATCCATCGTT TCTCGCGGGA GTTGGATGAT
CTCGAAACTC GCCTTAAGCA AAGCTGGAAA AGAAAACTGG CCAGCCTGAA TGCAGAACTG
GAGAGTGCGG GCCGGGCACT CCAGGCATTG AGTCCACTGG CAGTGCTGGA ACGTGGCTTT
TCGATCAGCA AACGAGTACC CGGTGGTGAC CTGATTCAAT CCGTCAAGCA AGTGCAAGTG
GGTGATCGAT TGGCAACTCT GGTGGCCGAT GGGCAGATTC TCAGCCAGGT TTTGCAAGTT
GATGCGGACG ATGATCAGCA GGATCCTGCT TCGAGCGAAT CGTAG
 
Protein sequence
MPGNDLPKLT VSQLSDCLRE IVEMAFPRVI VTGEISGLTR ASSGHVYFTL KDEASQIKAV 
MWRSSAIKLK FDLRDGLAVE AIGGVEVYAP RGQYQLMVER LTPQGIGPLE LAFRQLHAKL
AAEGLFDVAR KRPLPRFPKR IAVITSPAGA AVHDILQILL RRWPGVNVVV VPVPVQGPEA
APKIAAALGM VHRLPDVDVV ICGRGGGSLE DLWAFNEELV ARAIAQCRIP VISAVGHETD
VTIADLVADQ RALTPSEAAE RVIPVKAEWV QHLDQLRDRL CSSLVALTNS RRKELEQLKK
RRALAKPLEQ IHRFSRELDD LETRLKQSWK RKLASLNAEL ESAGRALQAL SPLAVLERGF
SISKRVPGGD LIQSVKQVQV GDRLATLVAD GQILSQVLQV DADDDQQDPA SSES