Gene Plim_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0423 
Symbol 
ID9137082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp526434 
End bp527153 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content55% 
IMG OID 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_003628472 
Protein GI296120694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.58568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAGCAT TTGACATCCA TTCCCTCCCA CCCGAATTCC CACCGAGCGG TGTTTCCTTT 
ATGACGACCA AACCCAGCGT GGCGTCTGAG TCTGAGGGAT CACATCTCTC ACCTCCTGCT 
CCAGCAGAGG CGATCGTTTC GCAGACATCA ACCGATTTAG CGCCCTCGCG ACGCGACGCT 
GTCGCAGCCA TGCTCGCCTG TGGATCGTTT CTGGCTGCTG TCGCCATCCC GGTCTCTGCC 
GCAGTCGGCC TGACTCTCGA TCCTCTCCTC AGAAAGTCCG GTAGCACTGC GGATTCATCT 
CCAGGAGGCA ACCCGGCAGC AGAACTCGCC AGTGGATTTT TGCCAATCAT CAGGTTTGAC 
GAACTTCCTG AAGATGGAAC TCCTGTCAAA AGTGTCGTGC GGATTGATGT CCGCGATGCC 
TGGCAGGTTT TTCCTGATCA GCCAGTCGGA ACCATCTACC TGAGAAGATT TCCAGATCGA 
ACCGTCGTGG TCTTCAGCGA TATCTGTCCG CATCTGGGTT GCAAAGTCGA TTACGAAGCC 
GATCAAAGCC GGTTTTTCTG CCCCTGTCAC TCCAGTGCCT TTGCGCTCGA TGGCCAGGCC 
ATGAATAAAG TCTCGCCCCG GCCGCTGGAT CAATTGGAAG CACGCATTGA TCCCTCCGGA 
ATGGTCTGGG TCAAGTATCA GGAATTTCGA ACCGGGATCC CGGAAAAAGT CGTTGTTTGA
 
Protein sequence
MSAFDIHSLP PEFPPSGVSF MTTKPSVASE SEGSHLSPPA PAEAIVSQTS TDLAPSRRDA 
VAAMLACGSF LAAVAIPVSA AVGLTLDPLL RKSGSTADSS PGGNPAAELA SGFLPIIRFD 
ELPEDGTPVK SVVRIDVRDA WQVFPDQPVG TIYLRRFPDR TVVVFSDICP HLGCKVDYEA 
DQSRFFCPCH SSAFALDGQA MNKVSPRPLD QLEARIDPSG MVWVKYQEFR TGIPEKVVV