| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0413 |
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| Symbol | |
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| ID | 9137072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 519606 |
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| End bp | 521519 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | glycoside hydrolase family 13 domain protein |
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| Protein accession | YP_003628462 |
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| Protein GI | 296120684 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCCAG CGAACGTCTC TGTTGAAAAT CGTGTATCGG TTGAAAATCA GGCATCGAAA
CCATCAGAAA CGGCTCCTCA TCATGCGGGC ATGGGGGCGA TTCTTACACA ACAAGGTGTG
GCCTTCCGTG TTTGGGCACC ACACGCCGAG GCCGTCTCTG TGGTGGGAGA CTTCAACGAC
TGGCAGGAGA CTCGACATCC ACTTTCCCAG GAGTACCGCG AGCAATTGGA AGATCATGAG
CAGGCAGGAA CTGCTCCAGA ATCTGTCGCA AGTGGTTTCT GGTACGGCGA AGTCACAGGG
CTCAGTGTCG GTGCAGAGTA TTTGTACGCC TTAAAACTTG GCGAGAAGTG GATGACGCGC
ATTGACCCCT ACGCGAAAGA GGTCACGAAT TCCGTGGGTC ACGCCGTCGT GACAGATCCT
CATTTTGACT GGCAGAACGA TGCCTTCGAA CTGCCACCCA GGAACGAACT TATCATTTAT
GAGATGCATA TTGGCACCTT CGCCAAAGAT GCCGGCGATG GCCAGCCTGG AACACTTTCT
TCAGCAATTC GCCAGCTCGA TCATCTCAGA CGCACGGGTG TAAACTGTGT CGAAATCATG
CCTCTGGCAG AATTCGCTGG CGATTTCTCC TGGGGTTACA ATCCTGCTCA CATTTTCGCT
GTCGAGTCGA GTTATGGCGG GCCGAAAGCC TTTAAGGAGT TCGTTCGCGA AGCTCATCAA
AGAGGCATCG GGGTCATTCT TGATGTTGTC TACAATCACT TCGGTCCATC TGATCTGAGT
CTATGGCAAT TCGATGGCTG GAATGAAAAT CAACTCGGCG GTATCTACTT CTATAACGAC
TGGCGAGCTG AAACTCCCTG GGGCAGCACC CGCCCGGATT ACGGCCGACC CGAGGTTCGA
CAATACCTGT GTGATAATGC ACTCCACTGG CTTGAAGACT TTCATTGCGA TGGCCTCCGC
TTTGATATGA CGTTATATAT TCGCAGTGTG CGTGGCGATG GCGACCCCGG CGGTGATCTC
CCTGATGGGT GGTCTCTAAC GCAGTGGATC AATCGCGAAA TCCATGCGCG CCATCCCCAG
GCCCTGACAA TCGCGGAAGA TCTTCACAAT AAAGATGATC TGACAGCACC CGTCGAACGA
GGCGGAGCTG CCTTCTCCGC GCAGTGGGAT GCCAGGTTTG TTCATCCAGT ACGAGAAGTC
CTGATTGAAC CCGATGATGA TGACCGTTCA CTCGATTCCA TTAAGGGGGC CATCTTCGCC
ACTTTCAACG GCGACCCATT TGAACGTGTC ATCTATACCG AATCTCACGA TGAGGTAGCA
AACGGCAAAG CCCGCATCCC TTCAGAAGTC ATGCCGCTCG AAACTCGCAA CTGGTTTGCC
CAGAAGCGCG CCACTTTAGG CCTCGCCCTG GTCATGACAA CCCCCGGAAT TCCAATGGTC
TTTCAAGGAC AGGAATTTCT GGAAGACGGC TGGTTCCGCG ACGACGTGCC ACTCGACTGG
GATAAAGCTA TTGAACTCAA AGGAATTCTC CGGCTATTCC GGGATCTTTG CCACTTGAGA
CTCAATAACA AAGGCGTCTC TCGCGGATTG ACAGGTTCAG GACTTGCACT GCTATATGAA
GACCACACCG CTAAAACATT AGTATTCCAC CGCTGGCATA CACCAGCCCC ACACGACGAT
ATAGTAGTGA TCCTCAATTT TTACCGCGAA CCCCGGCAGG TCGAGTTCAA TTTCCCTAAT
GCAGCGACCT GGCAACTGGA ATTGAATTCA GACGCCAGGA TTTACAGTCC AGAATTCGCC
AATACGCCCT GTATCGATCA GCTGAATCTG CAGGATGAAG CCACCAATCC AGCTCACCAT
GTTTCGCTCG AAGTCGGCCC TTACTCGGCC TTGATCTTTT CGCGTCAAAC GTAG
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| Protein sequence | MVPANVSVEN RVSVENQASK PSETAPHHAG MGAILTQQGV AFRVWAPHAE AVSVVGDFND
WQETRHPLSQ EYREQLEDHE QAGTAPESVA SGFWYGEVTG LSVGAEYLYA LKLGEKWMTR
IDPYAKEVTN SVGHAVVTDP HFDWQNDAFE LPPRNELIIY EMHIGTFAKD AGDGQPGTLS
SAIRQLDHLR RTGVNCVEIM PLAEFAGDFS WGYNPAHIFA VESSYGGPKA FKEFVREAHQ
RGIGVILDVV YNHFGPSDLS LWQFDGWNEN QLGGIYFYND WRAETPWGST RPDYGRPEVR
QYLCDNALHW LEDFHCDGLR FDMTLYIRSV RGDGDPGGDL PDGWSLTQWI NREIHARHPQ
ALTIAEDLHN KDDLTAPVER GGAAFSAQWD ARFVHPVREV LIEPDDDDRS LDSIKGAIFA
TFNGDPFERV IYTESHDEVA NGKARIPSEV MPLETRNWFA QKRATLGLAL VMTTPGIPMV
FQGQEFLEDG WFRDDVPLDW DKAIELKGIL RLFRDLCHLR LNNKGVSRGL TGSGLALLYE
DHTAKTLVFH RWHTPAPHDD IVVILNFYRE PRQVEFNFPN AATWQLELNS DARIYSPEFA
NTPCIDQLNL QDEATNPAHH VSLEVGPYSA LIFSRQT
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