| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0408 |
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| Symbol | |
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| ID | 9137067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 512038 |
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| End bp | 513750 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003628457 |
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| Protein GI | 296120679 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGC GTAAACTCGG ACAGATTCTG GTCGACCTGG GGTACATTTC AGAGGATCAA
CTCTGGGATG TGCTGGAGGA GCAGAAGCGC AGTCCGGGGG AGATCATCGG CCAGGTAGCG
ATCCGCATGG GTCTGGTGAC CGAAGCACAG GTCACAGAAG CTCTGGCGGA ACAATGGGGG
ATGCCAGTCG TCAATCTGGG AGAAACAACA ATCCCACCCC GCGCCATTGA AATGGTGCCC
CAGACGATGG CTGAACTTTA CAAGATCATG CCCATTTCTC TGAAGGATAA TGTGCTGACA
GTCGCCATGG CTGACCCGCA GAATGTGGCG GCCCTGGATG ATTTGAGGAA TTTTCTGGGA
GCCGAAGTCC GCGGTGCGAT TTCGAACTTG AAGGATGTCG AAGCGGCTAT TGCCCGTTAC
TACGCCGACA AGCAGGATAG TATTGAAGAT CTGATTACCT CGATGGAGGA ATCTTATGGA
GGGACCGGCG GCCAGAATAG CCGTGAATAT AATCTCGATG AAGCCGAGCT GGCTGATGCC
GCACCGATTC GTAAGCTGCT GAACATGATT CTGCTGCTGG CCATTAAGGA TCAGGCCAGC
GACATTCACT TTGAACCGTT TGAAGACGAG TTCAAGGTGC GTGTGAAAGC GGACGGGATG
CTCTATGAAA TGGTGCCACC CCCTCGTCAC CTGGCGAATG CCATTGTCAG TCGTATCAAG
ATTATGAGTG ATCTGGATAT TGCTGAACGT CGGCTCCCCC AGGACGGTCG AATTGAGCTG
AACGTGGGTG GGAACAGTGT GGACTTGCGA GTCAGTATTC TGCCCACACT GTTTGGCGAA
GCGGTCGTTA TGCGAGTGCT GGACCGAACG GTCGTGCAGC TCGATCTGAA TAAAATCGGG
ATGGACGCCA ATACGCTGAC ACGCTTTCGC AGCATGATCA AGCGGCCGAA CGGCATTGTG
CTGGTGACGG GACCGACAGG TTCTGGCAAG ACGACCACGC TGTATTCGGC TTTAAATGAA
CTCAATGACG TTGAAACCAA GATCATTACG ACAGAAGACC CGATTGAATA CGAAATCGAG
GGCCTGCTGC AGGTGCCTGT GAACCATGAT ATCGGGGTGA CTTTCGCGAC GGTGCTGCGA
GCGATTTTGC GTCACGATCC TGACACGATT CTGGTGGGTG AGATTCGCGA CTACGAAACG
GCTGAAGTTT CAGTTCAATC CGCACTTACG GGGCACCTGG TCTTCAGTAC GCTGCATACC
AACGATGCCC CATCGGCGAT TACTCGATTG CGGGATATGG GTGTCCCACC CTTCCTGATT
ACGGCTTGTG TTGAAGCAGT ACTGGCTCAG CGGCTGGTGC GACGAATCTG TACAGAATGC
CGCACGAAGT TTGATCCCAG TGATGAATTG CTGATGGAGT TGCAACTGCC GATTCAGCAG
GCTCGTAAAT ATAATTTCTA CTACGGCAAA GGTTGCCAGC GTTGTAACAA CTCTGGCTAT
AAAGGCCGTT GCGGAATTTA CGAACTGCTG GATGTCACAG ACGATATTCG CGATCTGATT
GCCGCGAGTG CTTCTGTGGA CGACATCCGT AATTTTGCCC GCTCGCAGGG GATGACCACT
TTGCGAGAGG CCGGATTGAA GCTGATTTTT GACGGTGTGA CCACGATTGA TGAAATTGTG
AGGGAAACAA TTACGGAAGA TGGCGAAGGC TAA
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| Protein sequence | MAQRKLGQIL VDLGYISEDQ LWDVLEEQKR SPGEIIGQVA IRMGLVTEAQ VTEALAEQWG
MPVVNLGETT IPPRAIEMVP QTMAELYKIM PISLKDNVLT VAMADPQNVA ALDDLRNFLG
AEVRGAISNL KDVEAAIARY YADKQDSIED LITSMEESYG GTGGQNSREY NLDEAELADA
APIRKLLNMI LLLAIKDQAS DIHFEPFEDE FKVRVKADGM LYEMVPPPRH LANAIVSRIK
IMSDLDIAER RLPQDGRIEL NVGGNSVDLR VSILPTLFGE AVVMRVLDRT VVQLDLNKIG
MDANTLTRFR SMIKRPNGIV LVTGPTGSGK TTTLYSALNE LNDVETKIIT TEDPIEYEIE
GLLQVPVNHD IGVTFATVLR AILRHDPDTI LVGEIRDYET AEVSVQSALT GHLVFSTLHT
NDAPSAITRL RDMGVPPFLI TACVEAVLAQ RLVRRICTEC RTKFDPSDEL LMELQLPIQQ
ARKYNFYYGK GCQRCNNSGY KGRCGIYELL DVTDDIRDLI AASASVDDIR NFARSQGMTT
LREAGLKLIF DGVTTIDEIV RETITEDGEG
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