Gene Plim_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0404 
Symbol 
ID9137063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp507055 
End bp508137 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628453 
Protein GI296120675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCTA AATACGTAAT ATTGCCGATC GGTCGCCAGC CGGTTCAGAG AATCTCTGAG 
CGACGCGGCT TTACGCTGAT CGAACTGCTG GTTGTGATCT CGATTCTGGT CACGCTCCTG
GTCATCACTG CGACGATGGT GCGACTGAGC CTCGATGGTG ACAAAGTCCG CGCAGGTGCC
AGGCAGATAC AGTCGTTCCT CAATGGTGCG CGTGACCGAG CCATTTATGC TAAAGCACCC
GTGGGTGTCC GTTTCATCAA GAGTCCGAAT AATGACCGCA CGATTACAAG TATGGTGTAT
ATCCAACCTG GTGAGCTATG GTCGGATGGA ACGATTGAAT TGCGACGGGA TGAATCGAAC
CTGACTTCGA CCGATGTTCG AGTGGTGGCT GAAGCGGCAG GAACGAACTG GTCCAATCTC
ATTTCTCGCC AGCGATTTCC TAATGACATT CGCATTCGGA TTCCTAAAGG AAGCCAGGGG
ACGTGGTATC GAGCAACCTT GGATACCAGT GCCGGCCAGA TTCGTTTACG GCTCACAACT
CCCTTCCGTT TACCAGCAGA AACACCTTCA GGAACACTTG AGGCCTTCGC TGCAGGCCGG
GATGGTGTCA CAACCTATGA CCTGCAACTC GATCCGGTAC CGTTTGTGGG TCAGAAGCCC
GTCTTTCTGC CCGCAGGTGT GGTCGTGCAT CTCGATCGAT GCTCCCGGAA TATCGACAAT
CTCGCGACAG CTTCTGCCAG GGGAAATATT CTACCGACCG CCTGGCGAGA TGGCTCAGTC
AATCCCCCTC GCTATAGCAA CCAGATTGAC ATCATGTTCT CGCCCAGTGG CACCGTCATT
GGTCAGGCCG CCACAGCGGG TTTACTACAT CTCTACGTTG GAACACAAAA AGATGCCGAT
CTGGATCGAC TGGCTTGGGA AAGCGGCTCT GCTGCCGAAC TGGAAGACAG CGAAAACCGA
GGCGATAAGT ACTTTGTCAG TGTGGCAACT CGCACGGGAG CAGTTTCTGT GCATGAATTG
GGATACGGAG CAGGGAGTGA TCGCTTGCTG TATGCCGAAA CTGGTGAAGG AGCCGGTAAA
TGA
 
Protein sequence
MFAKYVILPI GRQPVQRISE RRGFTLIELL VVISILVTLL VITATMVRLS LDGDKVRAGA 
RQIQSFLNGA RDRAIYAKAP VGVRFIKSPN NDRTITSMVY IQPGELWSDG TIELRRDESN
LTSTDVRVVA EAAGTNWSNL ISRQRFPNDI RIRIPKGSQG TWYRATLDTS AGQIRLRLTT
PFRLPAETPS GTLEAFAAGR DGVTTYDLQL DPVPFVGQKP VFLPAGVVVH LDRCSRNIDN
LATASARGNI LPTAWRDGSV NPPRYSNQID IMFSPSGTVI GQAATAGLLH LYVGTQKDAD
LDRLAWESGS AAELEDSENR GDKYFVSVAT RTGAVSVHEL GYGAGSDRLL YAETGEGAGK