Gene Plim_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0386 
Symbol 
ID9137045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp480906 
End bp482213 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF1597 
Protein accessionYP_003628435 
Protein GI296120657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTTT CTCTCCCAAA GTCCTGGCGG ACATCACTGG CTCGCGCCGG TGTGCTGCTG 
GGTGCTTTTG GCGCGATGGC AATGCCGGTG TTTGCTGAGG ATGCAACCAC GATTGCCGAA
CAGGCCAAAA AGCGTTTGAA CGGCGAAGTG GTGGCAGCCC CTGCCTCCCC GATTTACCAG
GTCAGCGCTA TGCAGGAACA GGTGCCTCCA CCTGTTCCTG GTGCCAACGT TGGTCAACCA
GACCAGATTT TCGTGGATCC TGGTTACGCT GCACCCGCAG AAGCTGAAGA AGCTGGTCCC
TGGACACTCC AGAGCGTGAT GGGCTCTGGC CTGGCCGATA AAGGCATCGT TTTTGGCGGA
TGGGCCGATA TCGGTTACTC CAGCAATCCT GACCTGTCGT TTACCAGCGC TGCTGAAGAC
GACAATGTCA ACCTCAGCCA GTTCTACATG TTCCTGAAGA AAGAAGCTGA CGGCTCCAAA
GGGATCGATT GGGGTTTCCG CTTCGACGCC CTCTACGGTA CTGACGGTGA CGACGCTCAG
TCGTTTGGTA ACCCCAACCG TACCTATGAC AACTCAGCTG CGTTTGATCA CGGGATCTAC
GAGTGGGCCT TGCCACAGCT CTACGGCGAA ATCGCTGTGG GAGATGTCTC GGTCAAGCTG
GGTCACTTCT ATACCATCAT CGGTTACGAA GTTGTGACCT CGCCTGACAA CTTCTTCTAC
AGCCGCCAGA TCATGTTCTG GAACAGTGAG CCCTTCACTC ACACCGGTGC TCTCGCCACT
TGGAAAGCCA GCGACAAGCT GACTGTCTGG GGCGGTTGGA CTGCTGGTTG GGATACCGGC
TTTGCCCAGT TCGATGGCGG TAGCAACTTC CTCGGTGGTA TGAGCTATGC TGCCACTGAC
AAGTTGAGCC TGGTCTACAC CACAGCTCTC GGCGATTTCG GTCTCCGTGG GACAGGGGCC
ATCAACAGCT TCATCCTCTC CTACATGATT ACCGACAAGC TCCAGTACGT TGGTCAGTAC
GACGTGCTCG GAACGAATAA CGACGTTGAT TTCCAGACAG ACGGTGTCGT TCGCGACTCG
AACGGTCTGG TCAACTACCT GTTCTACACG ATCAACGATC AGTGGAAGAC TGGTGCTCGT
TGGGAATGGT ACAAGCCCGA TGGTGTTTCG TACTACGAAA TGACCTACGG TGTGAACTAC
AAACCAACTC AAAACTTTGT TCTGCGTCCT GAAGTCCGCT ACCAGTGGGC TCCTGGAATC
AGCTACGAAG AATTCATCTT CGGCGTCGAC GCTATCTTCA AGTTCTAA
 
Protein sequence
MQFSLPKSWR TSLARAGVLL GAFGAMAMPV FAEDATTIAE QAKKRLNGEV VAAPASPIYQ 
VSAMQEQVPP PVPGANVGQP DQIFVDPGYA APAEAEEAGP WTLQSVMGSG LADKGIVFGG
WADIGYSSNP DLSFTSAAED DNVNLSQFYM FLKKEADGSK GIDWGFRFDA LYGTDGDDAQ
SFGNPNRTYD NSAAFDHGIY EWALPQLYGE IAVGDVSVKL GHFYTIIGYE VVTSPDNFFY
SRQIMFWNSE PFTHTGALAT WKASDKLTVW GGWTAGWDTG FAQFDGGSNF LGGMSYAATD
KLSLVYTTAL GDFGLRGTGA INSFILSYMI TDKLQYVGQY DVLGTNNDVD FQTDGVVRDS
NGLVNYLFYT INDQWKTGAR WEWYKPDGVS YYEMTYGVNY KPTQNFVLRP EVRYQWAPGI
SYEEFIFGVD AIFKF