Gene Plim_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0383 
Symbol 
ID9137042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp478701 
End bp479570 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content55% 
IMG OID 
Productapurinic endonuclease Apn1 
Protein accessionYP_003628433 
Protein GI296120655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.469557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGATTC TTGGTGCGCA CATGTCGATT GCGGGGGGCT GTTATAAAGC CCTCGAAGCG 
GGTCATCGCC TGGGGATGGG CTGCGTGCAG CTCTTCACCA AGAATAACAA TCAATGGCGG
GGGAAACCGC TGACAGAGGA CGACATTCGC CAATTCCAGA CGACCTGGAA ATCGACCGGA
ATTCAGGCCA CCTGCGCTCA TGCCAGTTAT CTGATCAACT TAGCCAGTCC TGATGACGTG
CTTTGGAATA AATCCTGCGA TGCCCTCGTG GATGAACTGG AGCGAGCCGA AGCGCTGGGG
ATTCCCGGCG TCGTGTTGCA TCCCGGCAGT GCCGTCAAAT CGACGCCCGA AGCCGGGATT
ACCCGCGTGA TTGAAGCCCT GGACGATGTC CATGCGAAGT GCAAAGGATT TCGGGCTCAG
GTCTGGCTCG AAACGACTGC CGGTCAGGGA AGTTGCCTCG GCGCCCGGTT TGAAGAGTTG
TCTCAGATGC TCGATGGTGT GCGGGAACCG GATCGAATTG GAATCTGCAT CGATACCTGT
CACATTTTCG CCGCTGGTTA TCCACTACAT ACGGCTGATG ATTACGCGGA CACTTTGGAG
AAGTTTTCGC AAAAGATTGG CTTCGATCGC GTGCGTGCGT TTCATCTCAA TGACAGTATG
AAAGGGTTGG GCAGTCGGGT GGATCGACAT GCCCATATTG GCGAAGGGCA GCTGGGTCGC
ATCCCTTTTT CGCGATTGCT CCATGACGAT CGGTTGTCCC ACATCCCCAA GTATCTGGAG
ACCGAAAAAG GGGAGCGGGA TGGCGTGGAT CTCGATCTGA TCAATTTGCA GACACTCCAG
CAACTCATCG CGAATCCTGA ACACGACTGA
 
Protein sequence
MSILGAHMSI AGGCYKALEA GHRLGMGCVQ LFTKNNNQWR GKPLTEDDIR QFQTTWKSTG 
IQATCAHASY LINLASPDDV LWNKSCDALV DELERAEALG IPGVVLHPGS AVKSTPEAGI
TRVIEALDDV HAKCKGFRAQ VWLETTAGQG SCLGARFEEL SQMLDGVREP DRIGICIDTC
HIFAAGYPLH TADDYADTLE KFSQKIGFDR VRAFHLNDSM KGLGSRVDRH AHIGEGQLGR
IPFSRLLHDD RLSHIPKYLE TEKGERDGVD LDLINLQTLQ QLIANPEHD