Gene Plim_0380 details

Gene Information

• Locus tag: Plim_0380
• ID: 9137039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 473382
• End bp: 475493
• Gene Length: 2112 bp
• Protein Length: 703 aa
• Translation table: 11
• GC content: 55%
• Product: Polyribonucleotide nucleotidyltransferase
• Protein accession: YP_003628430
• Protein GI: 296120652

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000345435
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTTA CCGTAGAGCG TCAGTTTGCA GGTCGCACCT TATCCATCAC CACCGGCGAG 
TTAGCCAAGC AGGCTGCTGG CGCTGTGACA ATTCAATATG GCGAAACAAT GGTTTTCGTC 
GCTGCTCAGA ATGGCCCTTC CCGCCCGGGA ACCGATTTCT TCCCGCTGAC ATGCGACTAT 
CGGGAGCGTC TGGCTGCCGC TGGGAAGTTT CCTGGTGGAT TCATCAAGCG AGAAGGTCGC 
CCCACACTTC GCGAAGTGCT GACGAGTCGC CTGACTGACC GTCCCATTCG ACCACTCTTC 
CCCGAAGGGT ATATTGAAGA AGTGCAGGTC ATGTCGAACG TGCTCGCCTC AGATGGCGTG 
AACGATCCCG ATGTGTTGTC GATTATTGGT GCCAGTGCCG CGCTTTGCCT GGCTCCGGTT 
CCTTTCCAGG GACCACTGGC CGCTGTGCGG GTGGGCTTGA TCGATGGCGA ATTCATCCTC 
TTCCCGACTC AGGAACAGAT TGCCGATTCC GAACTGGATC TGGTGGTAGC CGGTACTGAG 
AAGTCCGTGC TGATGATTGA AGGCTTCGGT AAGCAACTTC CCGAAGATCA GATGGCCGAT 
GCCATTATGT TCGGGCACCG GACCATTGTC GAATTGTGCC AGTTGCAGCT GGAACTGGTT 
GCGAAGTCCG GCCGCGAACG ATTTGTGCTC CCTGCTCCCG AAGCCAATCC TTTTGAAGCG 
ATTCTGCTCG AAAAGGCTTA TGCCAAACTG CGTGAAGTCA AGCAGTCGAG CGTCAAGAAA 
GAGCGTAGCA GCCAGACATC GGCCTACAAG AAAGAACTTC TTGCCGAATT CTTTCCCAAT 
GATGCTGAAA CGACCGCCGC TGGGCTGACG AAAGCACAGT TCTTCGCCGC CTTTTATGCA 
GTTGAAACCA AGGCAGTTCG CGACTTGATT CTTGATGGCG TACGTCTGGA TGGACGGAAG 
CACGACGATC TCCGCGCTGT TAGTTGTGCG GCCAGTGTCT TGCCACGAGT TCACGGCTCT 
TCACTCTTCA CACGGGGTGA AACTCAATCG CTGGCAACCG TGACATTGGG AACGATTCGC 
GATGTCCAGC GCGTGGAAGG GCTCTTTGGC GAAGAAGCCA AAGCCTTTAT GCTCGACTAC 
TACTTCCCTC CTTACTCTGT GGGTGAATGC AAGCCTTTGC GTGGCCCTGG TCGTCGCGAA 
TTGGGTCATG GGGCCTTGGC TGAACGATCC GTTGCCAGCG TTCTGCCCTC GCCGGAAAAG 
TTCCCCTATA CGATACGAGT CATCTCGGAC ATTCTCGAAT CGAACGGATC GAGTTCGATG 
GCTTCAGTCT GCAGTGCAAC ACTGGCACTG ATGGACGCCG GTGTGCCCAT CAGCCAGCCA 
GTGGCTGGGA TTTCGATTGG ACTTGTGAAG TCGGCTGACC GGTTCATTCT CCTCACAGAC 
ATCATGGGTG ATGAAGATCA CTTTGGTGAT ATGGACTTCA AGGTGGCCGG TACTCAAAAG 
GGCGTGACTG GCATCCAGCT CGACCTGAAG ATCGATGGCA TCAGCGAAGA AATCGTGCGG 
GCCACACTCG AGCAGGCCAA GAAAGCCCGT ATCGAACTGC TCAAGACGAT GCTCAGTGCC 
ATTCGTCGGC CTCGCTCCGA GATTTCGACA CACGCACCGA GACTGCTTCG TACCAAGATC 
GACCCCAGCA AGATCGGCCT GCTGATTGGT CCCGGTGGCA AGAATATTCG AGCCATTCAG 
GAACAGACCG GTGCGACAAT CGATATCGAA GATGATGGAA CTGTGGTGAT CGCCAGCAGT 
TCGAGCGTGG GTGCCGAAGA CGCACTGGCC CGAGTCGAAG CGATCGCTGA AGAGATCAAG 
GTCGGCCGGG TCTATAACGG GACGGTCAGC TCGATCAAGG ATTTCGGTGC CTTTATCGAA 
ATCGCTCCGG GCAAAGATGG GCTCTGCCAC ATCAGCGAAC TCTCGGACGG CTTCGTGAAG 
AATGTGAACG AAGTTGTCCA GGTGGGCGAG AAGATTCAGG TGAAAGTCAT CGCCATCGAC 
GAACAGAACC GTGTCAAGCT TTCGCGGAAG GCTGTATTGG CTGATGAAGC CGAGAAGCCA 
GCCGCTGAGT AA 

 

Protein sequence

MKVTVERQFA GRTLSITTGE LAKQAAGAVT IQYGETMVFV AAQNGPSRPG TDFFPLTCDY 
RERLAAAGKF PGGFIKREGR PTLREVLTSR LTDRPIRPLF PEGYIEEVQV MSNVLASDGV 
NDPDVLSIIG ASAALCLAPV PFQGPLAAVR VGLIDGEFIL FPTQEQIADS ELDLVVAGTE 
KSVLMIEGFG KQLPEDQMAD AIMFGHRTIV ELCQLQLELV AKSGRERFVL PAPEANPFEA 
ILLEKAYAKL REVKQSSVKK ERSSQTSAYK KELLAEFFPN DAETTAAGLT KAQFFAAFYA 
VETKAVRDLI LDGVRLDGRK HDDLRAVSCA ASVLPRVHGS SLFTRGETQS LATVTLGTIR 
DVQRVEGLFG EEAKAFMLDY YFPPYSVGEC KPLRGPGRRE LGHGALAERS VASVLPSPEK 
FPYTIRVISD ILESNGSSSM ASVCSATLAL MDAGVPISQP VAGISIGLVK SADRFILLTD 
IMGDEDHFGD MDFKVAGTQK GVTGIQLDLK IDGISEEIVR ATLEQAKKAR IELLKTMLSA 
IRRPRSEIST HAPRLLRTKI DPSKIGLLIG PGGKNIRAIQ EQTGATIDIE DDGTVVIASS 
SSVGAEDALA RVEAIAEEIK VGRVYNGTVS SIKDFGAFIE IAPGKDGLCH ISELSDGFVK 
NVNEVVQVGE KIQVKVIAID EQNRVKLSRK AVLADEAEKP AAE