| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0376 |
|---|
| Symbol | |
|---|
| ID | 9137035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 466906 |
|---|
| End bp | 467337 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | signal peptide-containing protein |
|---|
| Protein accession | YP_003628426 |
|---|
| Protein GI | 296120648 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000121487 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACAT ATACAAATTG GAAAAGCTAT CTGCCGGTCA TGGCCTTGAG TGCCGGATGG
CTGCTGACAG GCTTAGCCGG GTGCGGCGGG GGCAGTGATG CACCTCAGCG GTATCCGATA
TTGGGGCGGG TCACTTTGGA TGGAAATCCA CTGGAACATG GCGAAGTGCT GATTCTGCCT
GCGGATGGCA AGGGGCGGCC CGATGCCGGG GCAATCAAGA ATGGAGAATT TGCGTTTGAT
TGCACCTCAG GTTCGAAACG CGTGGAGATT ACTTCTACGA AGGAGATTCC GCCCGCTTCT
CCCGGAGGGA TGCCCGACTA TGTGGCATTA ATCCCCCAAA AGTATAACTC AGCCTCGACG
TTGACTGCCG AAGTGAAACC CAGCCGGAAT GTGAGTGATA ACACGTTCGA GTTTTCGTTG
AAGACGAAGT AG
|
|---|
| Protein sequence | MSTYTNWKSY LPVMALSAGW LLTGLAGCGG GSDAPQRYPI LGRVTLDGNP LEHGEVLILP
ADGKGRPDAG AIKNGEFAFD CTSGSKRVEI TSTKEIPPAS PGGMPDYVAL IPQKYNSAST
LTAEVKPSRN VSDNTFEFSL KTK
|
|---|
| |