Gene Plim_0374 details

Gene Information

• Locus tag: Plim_0374
• ID: 9137033
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 463283
• End bp: 465394
• Gene Length: 2112 bp
• Protein Length: 703 aa
• Translation table: 11
• GC content: 53%
• Product: coagulation factor 5/8 type domain protein
• Protein accession: YP_003628424
• Protein GI: 296120646

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.443509
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCAGGT ATGCACCGGA AGTTTTCACT CCCCTGAATC TCCGGCTGTG GCGACTGCTG 
GCACTACTGC TAATAGGCTT ACTCTCAACT TCAAATCTGC AGGCCGAAGC GAAAACTCCC 
TGGTTTGATC AACTCGCCCG CATCCTCAGT CCTCAAGTTG CTCAGTTATC TCGCTCGGAG 
CAGGATCTGA AGAGCCGGTT GGCGTCGCTG CCTCTGTACA CACCACAAGA AGTCTTGCGC 
GCGGGCTATC ACTCACAATT CCAACCTTCA CGAGATGATC AGGAATGGAT TCAGGTCGAT 
CTGGGGGCCA TTCGGACATT CGAATCGATT GTGCTCGCTC CTGTCCTGCT CAGGTTGAAT 
GATCAGCAAA TCCCGGGCTA TGGCTTTCCC AAAAGGTTTC GAGTGGAAGT TGCAGATCAG 
TTGGATTTTC AGAATCCGAG AATACTGGCC GATTTCACCG CAGAAGATTT TCCCGCACCA 
GGCTACTTCC CGGTCCAAAT TGCGACGCCG GGAGCTATTG GTCGTTATGT ACGGATCACC 
TTCACACGAC TGGCAACGTT GGATGGAAAT CACTTTGTGG CGATTGGCGA ACTGCTCGTC 
ATCTCGGGCA TGCGGAACAT TGCCTTCTGG CGGCCGGTCG ATGCCAAGAG TTCCATCGAG 
GCCGACTTAC GCTGGTCCAC TGAATATCTA GTCGATGAGT TCTCTGTCAT CCCCCCACCC 
GTCGGCTTGC AGAAAAGTCC ATCCGATGGT TTTCAACAGA AAGGGCCCAA GGCCACTCAG 
CTCACAATCA CCATCGATCT GGGCGAAACC TACCCCATCG ACGAAGTGCG GCTCTACCCG 
GCTCAACCCA CCGATTCACC CAGTTCTCCC GGATGGGGAT TCCCCACCAG CTTTCAAATC 
CTCTTAAGCA ACTCTCCCGA ATTTGAAGAT GCCGAAGCGA TCCTCGATTT CAGTCGTTTT 
GAACTGCGTC ACTGGACAGA TCGGCCGCTG ATCATTCCTG TCGCCTCTCG CAGGTTGTTC 
AGGCAGCAGC TACCACAACT TCACGATATG CGCGGCGAGG TCGATTTACC CATTGATCCA 
CTCCCTGCCC GATATGTGCG ATTGATCGTC AACGTGCCCG ATGAACGGCA ATCGCCCCCA 
GTCGCAGCGC TGGCCGAGAT GCAGGTCTAC GCCGGCGATC AGAATGTGGC CCTCAAAAAA 
CGAGTCACCA TCACTCACTC TGACACTGCT TCCACTGGGT CTGATAAGTC TGAAACAGCT 
TCCTCACGCT GGTTTCCCGC TGCGATCGTC GATGATTTCA CCAGTCGCAA CGACATTATC 
GAACTGGCGA ACTGGCTGAA GCAGATCGAT TTACGCCGGC AGTACGAAGC CCAGCTTTCC 
AGTGTGCAGG AAAAGCTCGC ACAGAGCCGC AGTTCGTTCT GGGTGAATGC TGGTGTCGGA 
GGTGGCGGCA TTCTCATCTT GTCACTGAGC TTCTTACTGA CGGCCATCCT CTGGCAGAAA 
GGTCGAATTC ACCGCGAAAC GACAAAACTT CGCGAACGCA TTGCCAGTGA CCTGCATGAT 
GACATTGGCA GTAATCTTGG AACCATTGCC CTCATGAGCC GAAATCTCGC GACCGAGACA 
GGCATCCCGC AGGAATCGAC ACACGATTTG ATTGAGATTT CCAAGATTGC CACCGAGACC 
AGCCAGGCGA TGCGGGATAT GCTCTGGATT ATTAAACCTG CACCGCTCAC TCTGGAAGAG 
TTCATCAGCC AGGTACGTCA ATCCGCGACG CGAATGCTCG GGAATCTGGA TCTCAAGATC 
GAGACACCGA AAGAGATCCC GGAGGTGACG GTCGATATCG TCTGGCGGAG GAATTTATTT 
CTTTCGATCA AAGAAATCTT TCACAATTTG AGCCGCCATA GCCTGGCGAC GGCTGTCTCG 
ATCACGATTA TTCTTGATCG CAAATCGTTT CTGTTGGAAA TCGTTGATAA TGGCGTCGGT 
TTTGACTCAC AAAAGGTGCT GACAGGGGAT GGTCTGCCGA ACATTCGCAA ACGAATCGGC 
GAACTGCACG GCTCCATCGA GTTCTTGACG GGAACTCCGC ACACGACCAC CTTGAAAGTG 
CCACTCCCGT AA 

 

Protein sequence

MARYAPEVFT PLNLRLWRLL ALLLIGLLST SNLQAEAKTP WFDQLARILS PQVAQLSRSE 
QDLKSRLASL PLYTPQEVLR AGYHSQFQPS RDDQEWIQVD LGAIRTFESI VLAPVLLRLN 
DQQIPGYGFP KRFRVEVADQ LDFQNPRILA DFTAEDFPAP GYFPVQIATP GAIGRYVRIT 
FTRLATLDGN HFVAIGELLV ISGMRNIAFW RPVDAKSSIE ADLRWSTEYL VDEFSVIPPP 
VGLQKSPSDG FQQKGPKATQ LTITIDLGET YPIDEVRLYP AQPTDSPSSP GWGFPTSFQI 
LLSNSPEFED AEAILDFSRF ELRHWTDRPL IIPVASRRLF RQQLPQLHDM RGEVDLPIDP 
LPARYVRLIV NVPDERQSPP VAALAEMQVY AGDQNVALKK RVTITHSDTA STGSDKSETA 
SSRWFPAAIV DDFTSRNDII ELANWLKQID LRRQYEAQLS SVQEKLAQSR SSFWVNAGVG 
GGGILILSLS FLLTAILWQK GRIHRETTKL RERIASDLHD DIGSNLGTIA LMSRNLATET 
GIPQESTHDL IEISKIATET SQAMRDMLWI IKPAPLTLEE FISQVRQSAT RMLGNLDLKI 
ETPKEIPEVT VDIVWRRNLF LSIKEIFHNL SRHSLATAVS ITIILDRKSF LLEIVDNGVG 
FDSQKVLTGD GLPNIRKRIG ELHGSIEFLT GTPHTTTLKV PLP