| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0309 |
|---|
| Symbol | |
|---|
| ID | 9136966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 390541 |
|---|
| End bp | 393165 |
|---|
| Gene Length | 2625 bp |
|---|
| Protein Length | 874 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | peptidase M14, carboxypeptidase A |
|---|
| Protein accession | YP_003628359 |
|---|
| Protein GI | 296120581 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.440571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCAG TCTGTTCGAT GTCTCAGAAG TTCAGGCAGG CCTGGTGTGA ATCAGCCATT
ACGCCAATGT TCACACGACT ACCGGTTCTG GTATTTCTCA TCGTCTTCGT TGCCAATCCC
GGTTTGACGA TCGGTCAAGA CGCAAAAATC GCTCAACAGT TCGTGGCCAA TCCCGATCTG
GATGTCCCTT TTGCCAAGTC CAATCCCCAC ATTTCCAGCA GCCCGGCAAC CTACCTGGGG
CGGCCGGTAG GAACCGACTT TCAGCTTGCC GACTGGAAAC AGGTGGCAGG TTACTATCAG
AAGCTCGATC AAGCATCCGA CGCATTGTTG CTGCAGAATG CTGGTAAGAC GACTGAAGGG
CGAGATCTGC TGGTGGCGGT GATCAGCAGC CCTGCGAATC TGGCACGTCT GCCGGAAATT
CAACGAGAGG CCAGATTAAT TGCCGATCCT CGGCTGGGAA CAGCCAATGA CCGTCTATTG
GCCCTCGCCC AGGGAACACC CATTGTCCTG ATCTCACTCA GCATGCATTC CGATGAACCA
GCCTCAACAG AAATGGGGAT GCAGCTGGCC TGGCTCCTGG CAACTTCCGA TGAAGCCCCC
TGGCGTGAAA TTCGCGAAAA CGTCGTCGTG GTGCTGATTC CTTCACTGAA TCCAGATGGT
GTGGATCATA TCGTTTCGTT CTATCGGGAG CGGGTTGGTA CCCCCTATGA AGGAGCTGCT
CTCAATAAGC TGTATCAGTT CTACACAGGG CACGACAACA ATCGTGACTT CTTCAGCCTG
ACGCAAAACG AAGCGCGCCT GATGACCCAC TTGCTTTACC ATGAGTGGAA GCCGCAGGTG
ATGTGGGATG CCCATCAGTA TGGTGCCGGG ACTCGCGAAC GGTTTTTTGT GCCACCTTAT
CGCGATCCGC TCAATCCGAA TCTGGATCGA GATGTGGTCG CAGCAATCAA TCTCATGGGA
ACTCGTGCTG TCGCCGACAT GACACGGGCC GGGCATTCAG GAATTGCGAC GGGGATTGGT
TACGACAACT GGTGGAACGG CGGGAATCGA TCAGTACCAG CTCGCCACAA CATGGTGGGG
ATTCTGACAG AAGCAGCTTC GGTCAACATC GCTTCGCCAG TTTTCATCAA ACCCAGCGAA
CTGAAAGATC CACTCCAGCG GCCCGAATAT CTCCCCTCCA ACCAGTTTAT TCATCCATGG
CCGGGAGGTT GGTGGCGACT GCAGGATATC GTCAACTACG AACTCGCCTT TGCAAAGTCG
ATGTTGAGCA GTGTCAGCCG GGAGCCTCGA TTCTGGCTGG AAACGACACA CGCCGCCGCC
AGTCGAGCCA TCAGCGATGG CCATGGAAAT GGCGTGCGGG GCTGGATCAT TCCGGCTCAA
CAGGTGGATC GCCACGCCAT TCGTCGGTTT GCCGATATTC TGCTGCTTTC GGGAATCGAG
CTGCATGTGG CCACCAAGCC CCTGCTGATC GATGGCCGGA GTTATCCTGC AGGATCGATC
GTGATACGTC GTGATCAACC CTATGGTCGC CATGCGAAAG ATCTGCTCGA GCTTAAGGGA
TTTCCTGCCG GGGAAAAACC TTACGATGTC TCTGGCTGGG CGTTGGCCCA TCTTTTTGGA
CTGCGCCGCG TGGAGGTGCT GGGAGATCTG CCTGACGATC TGCAGCCTGT CGCCACGGCT
GATGAAGCAA TCCGCGGCAT GACCATTGAT GCGCGTATTG CCGCTGGCGA CCGGCAGACA
TTGTCCACCA GAGATTCAGG CTCATGGAAA GCACTTACAG CCAGCCTGGG TCGTGGTGAT
GCGTGGGAGG TGGCCACCCA GGGAAAACTG ACCGGCTTAA TGCGTCCTGC CAACTCTCCA
TTTGGTATGG ATGAAGCCAC AGAGAAGGTG ACGATTTCCC GTCTGCCCAG AATTGGACTT
TATGCACCAT GGACAGCGAG CATGGATGAA GGTTGGCTGC GCTGGGTGCT GGATGATGCG
GGAATCCCCT TTGTCACAGT TCGTAACGAG ATGCTTAAAG CGGGAGAACT GCAGGAGTTT
CTCGATGTCC TCATCCTCCC CGATGTGACA TCGAAAACCA TCAATGAAGG GCGGGCACCA
GGAACGATTG AGGAACGCTA CGCCGGTGGG CTGGGGCCGG AGGGAATTCT GGCGATTGAT
CAGTTCGTGA AGCAGGGTGG CAAGTTGATC ACCACGGAAG GATCAGCTGC CTGGGCGATT
TCCCAGTTCA GTTTGCCCAT CGAGAATGTG GTCACTTCGA AGGATGCGGA AGGATTTTCC
TGTCCCGGCA GTGTGCTGCG TGTGACGCCT GCAGACGATC CATTAACTGC CGGTTTGCCC
GATTCCATCC CCATGATGTT TTCTGGTTCT GCAGCGTGGC AACTGAATGA AGGGAAATCT
GGTAAAGCGA ATAAATCGCA GTTGAAGACT TTAGCGAGCT ATCCGGAAAA CAATCTGCTG
CTGGCGGGTT TCATTGCAAG GCCAGAAGTT CTGGCCCAGA AGGGAGCCTG GGTCGAAGCT
AAAGTCGATG CGGGGAAAAT CCACCTCTTC GCCTTCCGCC CCCATTACCG CGCCTGGTCG
CAAGGAACGT TTCCTTTACT CTTCCGGGCA ATTTTGTTGC CGTAG
|
|---|
| Protein sequence | MFAVCSMSQK FRQAWCESAI TPMFTRLPVL VFLIVFVANP GLTIGQDAKI AQQFVANPDL
DVPFAKSNPH ISSSPATYLG RPVGTDFQLA DWKQVAGYYQ KLDQASDALL LQNAGKTTEG
RDLLVAVISS PANLARLPEI QREARLIADP RLGTANDRLL ALAQGTPIVL ISLSMHSDEP
ASTEMGMQLA WLLATSDEAP WREIRENVVV VLIPSLNPDG VDHIVSFYRE RVGTPYEGAA
LNKLYQFYTG HDNNRDFFSL TQNEARLMTH LLYHEWKPQV MWDAHQYGAG TRERFFVPPY
RDPLNPNLDR DVVAAINLMG TRAVADMTRA GHSGIATGIG YDNWWNGGNR SVPARHNMVG
ILTEAASVNI ASPVFIKPSE LKDPLQRPEY LPSNQFIHPW PGGWWRLQDI VNYELAFAKS
MLSSVSREPR FWLETTHAAA SRAISDGHGN GVRGWIIPAQ QVDRHAIRRF ADILLLSGIE
LHVATKPLLI DGRSYPAGSI VIRRDQPYGR HAKDLLELKG FPAGEKPYDV SGWALAHLFG
LRRVEVLGDL PDDLQPVATA DEAIRGMTID ARIAAGDRQT LSTRDSGSWK ALTASLGRGD
AWEVATQGKL TGLMRPANSP FGMDEATEKV TISRLPRIGL YAPWTASMDE GWLRWVLDDA
GIPFVTVRNE MLKAGELQEF LDVLILPDVT SKTINEGRAP GTIEERYAGG LGPEGILAID
QFVKQGGKLI TTEGSAAWAI SQFSLPIENV VTSKDAEGFS CPGSVLRVTP ADDPLTAGLP
DSIPMMFSGS AAWQLNEGKS GKANKSQLKT LASYPENNLL LAGFIARPEV LAQKGAWVEA
KVDAGKIHLF AFRPHYRAWS QGTFPLLFRA ILLP
|
|---|
| |