Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0304 |
Symbol | |
ID | 9136961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 382946 |
End bp | 384079 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | protein of unknown function DUF1559 |
Protein accession | YP_003628354 |
Protein GI | 296120576 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.182759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGCCC TTCGCCCCAC CTGTTTTCGT TCTGGTGGCG CCGCTCGCCC CGGATTTACG CTGATTGAAC TCCTGGTGGT GATTGCCATC ATCACCACTC TGATCTCGCT GATCGCCCCG GCCGTTCAAG GTGCCCGCCG CGCAGCCCGC AAGCTGGAAT GCCTCAACAA CATGAAGAAC CTCGGCATCG CGATGCACAA CTTCGCCTCA GGCCGCGGTG GCAAACTCCC ACGTCTGGCA GAAGATCAGA CGGTCACGAC CACATTCACA ACAGCTGACC AGTCCACATT CTCAGCACTG ACTCCATCTG AGCAGCACAC GTTACGAGTG GGTTGGACCA TGCAACTCCT GCCTGTCCTC GACAACGCTG CTCTCTATCG CTCCATTCAG AGTCGCTCAG CGAAGTTCAC AGGTTCCGGC GGGCCTTATG CTGTTCTTAG CACCAATGAA CGCACCTGGT TGCCGTTCTT TACCTGCCCC GATGACCTCG TCAATCATCG CAAGGCACTG GGCCTCTCGT ATGTGGTGAA CTCCGGCATT GCCTCTGATG AGAACTGGGG TCAGGTTACC GATAACACCA ATGATCCAGC CGGTGGACAC AGTTCCGCTT CGATCAGTTG GGCAGATGCG ACTCTCACGA CCGCCAGCAC GAATGATCGC AATATGGGCA AGTCAACAGG GGTGATCTGG CGTGATACCG ATATGACACT CGATTTTGTG GGCACTGGCG ATGGAACTGA AAACACTATG ATGATTGCCG AAAACCTCAA CTCGGATAAC TGGGCCTCGG GAAATACATG GGATCTGGCT TTCGCCGCTA AGGTGGGCAG CACCGGTTGG GCTCCTGCAA CATCGCCCGC CTTCACCCAG GGATCTGCTC CATTTGGCGT CGGAAATATG GCCGCTTCAA CCAGTTCACC AGTCGGTGAT TCAAGACCAG GGGCTCCCGT TGTTGACAAC ACACGCAAAG CTCCCCGACC CAGCTCCAAT CATGGCGGCA GTGTTAACGT AGTTATGGTT AGCGGTGCCG GTCGATCGAT TGCCGATACC ATTGACCAGC GAGTCTACCT GAAGCTGCTC ACCTCAAACG GCCAGCAGTA CGGCGAAACG ACTCTCAACA GCAGCGACTT CTAA
|
Protein sequence | MKALRPTCFR SGGAARPGFT LIELLVVIAI ITTLISLIAP AVQGARRAAR KLECLNNMKN LGIAMHNFAS GRGGKLPRLA EDQTVTTTFT TADQSTFSAL TPSEQHTLRV GWTMQLLPVL DNAALYRSIQ SRSAKFTGSG GPYAVLSTNE RTWLPFFTCP DDLVNHRKAL GLSYVVNSGI ASDENWGQVT DNTNDPAGGH SSASISWADA TLTTASTNDR NMGKSTGVIW RDTDMTLDFV GTGDGTENTM MIAENLNSDN WASGNTWDLA FAAKVGSTGW APATSPAFTQ GSAPFGVGNM AASTSSPVGD SRPGAPVVDN TRKAPRPSSN HGGSVNVVMV SGAGRSIADT IDQRVYLKLL TSNGQQYGET TLNSSDF
|
| |