Gene Plim_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0304 
Symbol 
ID9136961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp382946 
End bp384079 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content56% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003628354 
Protein GI296120576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.182759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCC TTCGCCCCAC CTGTTTTCGT TCTGGTGGCG CCGCTCGCCC CGGATTTACG 
CTGATTGAAC TCCTGGTGGT GATTGCCATC ATCACCACTC TGATCTCGCT GATCGCCCCG
GCCGTTCAAG GTGCCCGCCG CGCAGCCCGC AAGCTGGAAT GCCTCAACAA CATGAAGAAC
CTCGGCATCG CGATGCACAA CTTCGCCTCA GGCCGCGGTG GCAAACTCCC ACGTCTGGCA
GAAGATCAGA CGGTCACGAC CACATTCACA ACAGCTGACC AGTCCACATT CTCAGCACTG
ACTCCATCTG AGCAGCACAC GTTACGAGTG GGTTGGACCA TGCAACTCCT GCCTGTCCTC
GACAACGCTG CTCTCTATCG CTCCATTCAG AGTCGCTCAG CGAAGTTCAC AGGTTCCGGC
GGGCCTTATG CTGTTCTTAG CACCAATGAA CGCACCTGGT TGCCGTTCTT TACCTGCCCC
GATGACCTCG TCAATCATCG CAAGGCACTG GGCCTCTCGT ATGTGGTGAA CTCCGGCATT
GCCTCTGATG AGAACTGGGG TCAGGTTACC GATAACACCA ATGATCCAGC CGGTGGACAC
AGTTCCGCTT CGATCAGTTG GGCAGATGCG ACTCTCACGA CCGCCAGCAC GAATGATCGC
AATATGGGCA AGTCAACAGG GGTGATCTGG CGTGATACCG ATATGACACT CGATTTTGTG
GGCACTGGCG ATGGAACTGA AAACACTATG ATGATTGCCG AAAACCTCAA CTCGGATAAC
TGGGCCTCGG GAAATACATG GGATCTGGCT TTCGCCGCTA AGGTGGGCAG CACCGGTTGG
GCTCCTGCAA CATCGCCCGC CTTCACCCAG GGATCTGCTC CATTTGGCGT CGGAAATATG
GCCGCTTCAA CCAGTTCACC AGTCGGTGAT TCAAGACCAG GGGCTCCCGT TGTTGACAAC
ACACGCAAAG CTCCCCGACC CAGCTCCAAT CATGGCGGCA GTGTTAACGT AGTTATGGTT
AGCGGTGCCG GTCGATCGAT TGCCGATACC ATTGACCAGC GAGTCTACCT GAAGCTGCTC
ACCTCAAACG GCCAGCAGTA CGGCGAAACG ACTCTCAACA GCAGCGACTT CTAA
 
Protein sequence
MKALRPTCFR SGGAARPGFT LIELLVVIAI ITTLISLIAP AVQGARRAAR KLECLNNMKN 
LGIAMHNFAS GRGGKLPRLA EDQTVTTTFT TADQSTFSAL TPSEQHTLRV GWTMQLLPVL
DNAALYRSIQ SRSAKFTGSG GPYAVLSTNE RTWLPFFTCP DDLVNHRKAL GLSYVVNSGI
ASDENWGQVT DNTNDPAGGH SSASISWADA TLTTASTNDR NMGKSTGVIW RDTDMTLDFV
GTGDGTENTM MIAENLNSDN WASGNTWDLA FAAKVGSTGW APATSPAFTQ GSAPFGVGNM
AASTSSPVGD SRPGAPVVDN TRKAPRPSSN HGGSVNVVMV SGAGRSIADT IDQRVYLKLL
TSNGQQYGET TLNSSDF