Gene Plim_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0276 
Symbol 
ID9136931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp351609 
End bp352880 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function UPF0118 
Protein accessionYP_003628326 
Protein GI296120548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.133789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCGA CCGTTGACAA TCTGCGTGAT CAATCGACCG TCAAAATCGT CTCTTTGCTG 
GTCCTTTCAG TCGTGATGGT CATTTTCATT CTGATGTTCT ATCAGGTGAT GGCCCCCTAC
CTGATGTCGC TTCTGTTAGC GGGAGTGCTT GCCATACTTG CGCAGCCGAT GCATAGCAGC
AGTCTGGCTT ACTGCCGCGG GTGGACATCT CTCGCTGCTG CCGCCACCAC CACCGGTGTC
GTCGTGGTGA TTGTCCTGCC CATCCTGTTT GCCATCCTGC TGACAGGATT AGAACTGTCG
GTCTTTGTGC AGGATAATCT TTCCGATTCC TCCTGGGAGC AGATCAAGTC GACTGTCTCA
CTTCGAATCG ATCAGTTTGT TCAACGCATC ATGCCTCTGA TGCCTGCGGG AGCCGACCAG
GAGGCTGTCA AAGAGCAACT TCTGACTGGC ATCCAGAATC AGGTCAAGCA ACTGGGCGTG
GGTGCCTCGG AAATTGCCAG CTCCACCTGG GGAATCATCG GTACTCTCAT CAACTTCTTT
ATTCAATTGA CTGTCTGCCT GCTGGGACTT TACTTCTTTC TGGCCGATGG CCCACGCATT
CTGCACGGCG CTCAGAATCT CATCCCCATC CAGCCGGAAT ACCAGCAGCA GGTCTTTGAT
CAATTCACGA AAGTGACCCG CTCTGTCGTC ATGGGGACAC TCGTGGCAGC CGTGGGTCAG
GGGATCGCCA TGTCTCTCGC GGTAGGAGTT CTGGGGATTG GGCACATTTT CGTCATTGGC
ATGGTCACCA CTGTCGCTGC CATGGTTCCG ATGATTGGTG CCGCCGGGGT GTATGTGCCC
ATGTCGATCT ATCTGGCAAC GCAAGGGCAC TACTTCACTG CGGCAGGATT ATTCCTGTTT
GGTTTTCTGG TGATCAGCAG CATCGATAAC GTCGTGCGTG CCTATACGTT GAGCAGCAAT
GTGCAGATGC ATCCGCTGCT CGGATTCGTT TCCATTCTCG GCGGGCTGGA AGCCTTTGGA
TTGTGGGGGA TTTTTCTGGG GCCCATGATC GCTTCGGTGT TGTACGCGCT GGCCAAGATT
TTCAATCAGG AACTGAAGGG CTTCATGGCC ACTTCCTCTC CAGCCAGAGG AGAATCAGCG
GGTGAGAAGC CAGGAGCAAA TTTTGTCTCG GATGTGACCG CCACCATCAT TGCTACGCCA
GTATCTGTGG TGGCCACCAT AGTCGATGCG GCACCACCAG CGCCCGAGGT TCCTAAGCCA
CCCGCCTGCT GA
 
Protein sequence
MPSTVDNLRD QSTVKIVSLL VLSVVMVIFI LMFYQVMAPY LMSLLLAGVL AILAQPMHSS 
SLAYCRGWTS LAAAATTTGV VVVIVLPILF AILLTGLELS VFVQDNLSDS SWEQIKSTVS
LRIDQFVQRI MPLMPAGADQ EAVKEQLLTG IQNQVKQLGV GASEIASSTW GIIGTLINFF
IQLTVCLLGL YFFLADGPRI LHGAQNLIPI QPEYQQQVFD QFTKVTRSVV MGTLVAAVGQ
GIAMSLAVGV LGIGHIFVIG MVTTVAAMVP MIGAAGVYVP MSIYLATQGH YFTAAGLFLF
GFLVISSIDN VVRAYTLSSN VQMHPLLGFV SILGGLEAFG LWGIFLGPMI ASVLYALAKI
FNQELKGFMA TSSPARGESA GEKPGANFVS DVTATIIATP VSVVATIVDA APPAPEVPKP
PAC