| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0266 |
|---|
| Symbol | |
|---|
| ID | 9136921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 337151 |
|---|
| End bp | 338410 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_003628316 |
|---|
| Protein GI | 296120538 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.571273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTT TGGCAACAGG ATTGACACTG GAGCAGTTCC TGTCGGGTTA TGCCGGTGAG
TTTACAGGAT TTCTGCTCGC AGTCCTGATT CACACGCTAC TGCTGTTCCA CGTCTTTGCA
GTTTCGCCAG CATTTTTTAT CTGGCTCGAA CGAAAAGTTT CCGGACGAAT TCAAGACCGT
CTGGGGCCGA CGCGTGTGGG TGGAAAGTTC GGCTGGCTCC AATCAGTGGC CGATGGAATC
AAGCTCATTC AGAAAGAAGA TCTCGCACCG GCTGCTGCCG ATCAATGGCT CTTTCGACTG
GCTCCTTATC TGGCATTGGT CGCGTCGTTT ACCGTCTTTA TGGTCCTCCC GTTTTCGCGC
GGGTGGGCCG CTGTGGTCAT CGAATCGAGT GTGTTTCTGG CATTGGCGAT TATCTCGCTG
GAGGTTCTGG GGATCATTCT GGCAGGCTGG TCGAGTGGCT CGAAGTGGGC ACTATTCGGC
TCGATGCGTG AAGCTGCCCA GATGGTGAGC TATGAAATCC CCCTCGCTTT GTGCGCCCTG
ATCCCTGTCA TGGCTGTGGG AACTTTAAAC TTTGTCACGA TCGCTGAAGT TCAAAGCGGG
TTCTTTCTGA CGAACTGGCT GATCTTTCAT GATCCATTCA CGTTTGTCGC TTTCTTTGTC
TACTTCACCG TAGCGATTGC CAGTGTGAAA CGAGCTCCCT TCGATCTTGC GGAAGCTGAG
AGTGAGCTGG TCGCCGGGTT TCATACCGAG TACAGCGGTA TGCGCTGGTC GTATTTTTTC
CTCGCTGAGT ATGCGAGCAT GCTGAGTGTC AGTTGTGTGG CTGTGCTGCT CTTTCTTGGC
GGCTGGTGGA GCGGAACTGG TCTGGAAGAC TTGCTGGCAC CTGTTCGAAA CTGGGGTCAG
AATTTTCCCG TGCAGGGCTT TTCTGCCGGG AACTATGCTC TGAATCTCCT GGGGGCCCAT
ATCTTCCTGT TCAAGGCCAG TCTGCTGGTG ACGGTGCAAA TCTGGGTAAG GTGGACGCTC
CCAAGACTGC GTATCGATCA GGTGATGACG ACTTGCCTGA AGTATCTGAT TCCAATCAGT
TGTGCGCTCT TTCTGGGAGC ATCGCTGTGG CCCTTGACTC TGACAACGAT TCTGGGCCGC
CCCATGCTGC TGGGCAGGCC CGTGGGCGAT CGTTTGTATG AGGCCAGTCA CCATTCTTCG
TCATTGCCTG CTGCAACCAA TCTCACCAGA ACCCCTGCGG CTAAGGAGGT GGTGCGATGA
|
|---|
| Protein sequence | MAILATGLTL EQFLSGYAGE FTGFLLAVLI HTLLLFHVFA VSPAFFIWLE RKVSGRIQDR
LGPTRVGGKF GWLQSVADGI KLIQKEDLAP AAADQWLFRL APYLALVASF TVFMVLPFSR
GWAAVVIESS VFLALAIISL EVLGIILAGW SSGSKWALFG SMREAAQMVS YEIPLALCAL
IPVMAVGTLN FVTIAEVQSG FFLTNWLIFH DPFTFVAFFV YFTVAIASVK RAPFDLAEAE
SELVAGFHTE YSGMRWSYFF LAEYASMLSV SCVAVLLFLG GWWSGTGLED LLAPVRNWGQ
NFPVQGFSAG NYALNLLGAH IFLFKASLLV TVQIWVRWTL PRLRIDQVMT TCLKYLIPIS
CALFLGASLW PLTLTTILGR PMLLGRPVGD RLYEASHHSS SLPAATNLTR TPAAKEVVR
|
|---|
| |