Gene Plim_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0256 
Symbol 
ID9136911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp325343 
End bp326269 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content52% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003628307 
Protein GI296120529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.392742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGAAA CGAAACAACT GACAAAACGT TATGGCGATC TCATTGCGGT CAACGAGATT 
AACCTGAGCC TGCGCGAAGG TGATGTCTTT GGCTTCATCG GGCCGAATGG TTCGGGTAAA
ACGACGACCA TGCGCATGCT CGCCACGCTG TTGAATCCTG ATTACGGCGA AGCTTACGTC
TGCGGGAAGT CGATCTATAC GAATCAGGAA GAGATTCGTC GACTGGTGGG CTATATGCCC
GATTTTTTCG GTGTCTATGA CGATATGACG GTGCTGGAAT ACCTGGAATT CTTCGCCGCC
TCGTATCGGA TTTCCGGGCC CGCTCGCCGC AAGATTTGCG AAGAGAAACT GGAACTGGTG
GACATGAGCT TCAAACGTGA TGCCATGGTC AACCAGCTTT CACGGGGACA GACGCAGCGT
ATTGGTCTGG CGCGTGTGCT CCTGCATGAG CCCCAGGTGC TGCTGCTCGA TGAACCCGCC
AGTGGTCTCG ATCCACGCGC TCGTATCGAA ATTCGAAATC TGCTCAAAAG ACTCGGTGAA
CTCAATAAGA CAGTGATCGT CTCGAGCCAC ATTCTGCCTG AACTCGCCGA TGTCTGTACC
CGCGTGGGCA TGATTGAAAA AGGTCATCTG ATTGTCGATG GCTATGTCGA TGAAGTCATG
CGCAAAGCCC GCCAGCAGAT TCTTCTGCAG ATTCAGGTGC GGGAACGACT GGAAGAGGCA
GCTAAGCTTC TCGAACAGCA TCCGCAGATT TCAAAAATCG AAATCGTAAA GGGCCAGATC
CACGCGACAC TCGCACTGGA AGTTCTTGAT TACAGCTCGA TTCCCAGTAC TCTGATCGAG
AATGGCTTCA AGCTGACGTT GTTCCGCGAA GAAGAAGTGA ATCTCGAAAC GGCCTTCCTC
TCATTGACTC GTGGACTGGT GCAGTAG
 
Protein sequence
MIETKQLTKR YGDLIAVNEI NLSLREGDVF GFIGPNGSGK TTTMRMLATL LNPDYGEAYV 
CGKSIYTNQE EIRRLVGYMP DFFGVYDDMT VLEYLEFFAA SYRISGPARR KICEEKLELV
DMSFKRDAMV NQLSRGQTQR IGLARVLLHE PQVLLLDEPA SGLDPRARIE IRNLLKRLGE
LNKTVIVSSH ILPELADVCT RVGMIEKGHL IVDGYVDEVM RKARQQILLQ IQVRERLEEA
AKLLEQHPQI SKIEIVKGQI HATLALEVLD YSSIPSTLIE NGFKLTLFRE EEVNLETAFL
SLTRGLVQ