Gene Plim_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0254 
Symbol 
ID9136909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp321906 
End bp322328 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content56% 
IMG OID 
Productprotein of unknown function UPF0047 
Protein accessionYP_003628305 
Protein GI296120527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCC ACACGGAATA CCTGACCTTC AACCTCCCGG CTCGCATGGC GTTTGAGAAC 
ATCACGCCGA AGATCGAGGC CATTGTGCGG GCCAGCGGCG TGCAGGAAGG GCTGGTGCTG
GTCAACGCGA TGCACATTAC CGCCAGCGTG TTCATTAATG ATGATGAGCC GGGTCTGCAC
AGCGACTACA AAAAGTGGCT CGAAAATCTC GCACCCTTCG ACGCTTCACC TCAGCGTTAC
GCTCACAATC GCACCGGTGA AGACAACGCC GACGCTCACA TGAAGCGGCA GATCATGGGC
CGGGAAGTGG TGGTGGCGAT TACCAAAGGC CAACTCGACT TCGGACCGTG GGAACAGATT
TTTTATGGCG AGTTCGACGG ACGTAGGGAT AAGCGGGTGC TGGTGAAAGT GATTGGGGAG
TGA
 
Protein sequence
MKSHTEYLTF NLPARMAFEN ITPKIEAIVR ASGVQEGLVL VNAMHITASV FINDDEPGLH 
SDYKKWLENL APFDASPQRY AHNRTGEDNA DAHMKRQIMG REVVVAITKG QLDFGPWEQI
FYGEFDGRRD KRVLVKVIGE