| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0245 |
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| Symbol | |
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| ID | 9136900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 315304 |
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| End bp | 316470 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_003628296 |
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| Protein GI | 296120518 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.107807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAC AGCCAGTCCC ACTGCTTGCT CCCTCTGCCT GGCCGGAGCT GACCAGTCAA
ACGGCAGGGG TGGGCGGTGT CTGGAAACAA TCCCCCGAAG ATTTTCTTGT CGAAGAAATC
CCGGCTTACC TTCCCTGCGG AGAAGGTGAG CATCTGTTTC TCTGGATCGA GAAGCGAAAT
CTTTCGAGTG AAATGCTAGT GGCACAGCTC TCGAAACAGC TCGCCGTTCC CCGCTCAGAA
ATTGGCATGG CGGGGTTGAA AGACAGGCAG GCCATTACCA GGCAATGGGT TTCTGTCCCC
ACCCGGGCTG AAAAGCTGGT ACCAGCTGTT GAGAGCGATG ATTTACAGGT GCTCGAAGCC
AGACGACATC GCAACAAGCT CAAGACGGGC CACTTAAAAG GGAATCGTTT TGTCGCTATT
TTGAGGGGCG TTGAACCCGA TCTTTCCAAA ATCGATGCCA TTACCCGGCA ACTGCAGGCT
CAAGGCTGCC CAAATTACTT CGGCATGCAG CGATTTGGGC ACCAGCACTC GACGTGGAAG
CTGGGCTGGC AACTGCTGCT GGGCCAGATC TCGCCACAAG ATATTCCCGC CCCCAGGCGA
AAGTTTCTGC TCCGACTCGC TCTCTCTGCT GTCCAATCCG GGCTGTTTAA CGAGGTGCTG
GCTCAGCGAC TGCGGGACGG GCTTTTCTCG ACAGTTCTCT GCGGCGACCT GATGGAAATT
CTCCCCGCTG GTGCGAAGTT TCTGGTCACA GATGCCGCTG CTGATCAGCC GCGCTTCGAC
TCGTGGGAAA TCTCCACCAC CGGACCCATT TTTGGTGTGC GCATGCGTTC GCCTGGGGGC
GAAGTTCATG CTCGCGAACT GGCGATCCTG CAGAAGTTAG TATTGACGAT CGAGCACTTT
CAGAAATTCT CCTCGCTGAT GGAAGGAACC CGGCGGCCCT TCCGATTCTT GCCTGCAGGC
CTGACCTGCG AATTGTTGCC CGCCAACAGT TCAGATCACG AAACGCCTCG CGGTGACCTC
CGCGTTTCCG TCGAACTCCC TGCTGGTGCC TATCTAACGG TTCTGCTGCA CGAGTTTCAG
AAGTCGCCCC TGGAAGCAGC GGAGTCTCCC GATTCTGCTG GCAATTCCGA GGATGCCGAC
GAGATCGCCT CACAATCGGC AGATTAA
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| Protein sequence | MTEQPVPLLA PSAWPELTSQ TAGVGGVWKQ SPEDFLVEEI PAYLPCGEGE HLFLWIEKRN
LSSEMLVAQL SKQLAVPRSE IGMAGLKDRQ AITRQWVSVP TRAEKLVPAV ESDDLQVLEA
RRHRNKLKTG HLKGNRFVAI LRGVEPDLSK IDAITRQLQA QGCPNYFGMQ RFGHQHSTWK
LGWQLLLGQI SPQDIPAPRR KFLLRLALSA VQSGLFNEVL AQRLRDGLFS TVLCGDLMEI
LPAGAKFLVT DAAADQPRFD SWEISTTGPI FGVRMRSPGG EVHARELAIL QKLVLTIEHF
QKFSSLMEGT RRPFRFLPAG LTCELLPANS SDHETPRGDL RVSVELPAGA YLTVLLHEFQ
KSPLEAAESP DSAGNSEDAD EIASQSAD
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