Gene Plim_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0221 
Symbol 
ID9136876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp285885 
End bp287228 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content56% 
IMG OID 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003628272 
Protein GI296120494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCAGC AAGTATTTCT CCGTGGGCTC GTGGTTTTCG CGACCGCTCT CCTTCTCACA 
CTTCCTGGCA TGACTAACGC TGAAGACTGG CCGCAATGGA TGGGGCTCAA TCGGGATGGA
CGCTGGCACG AAACAGGGCT CCTCCGCGAG TTTCCGGCTG ACGGGGCCAA GTTCGCCTGG
CGGGTTCCCG TGGGCATGGG CTACAGCGGC CCGGCTGTCG CTGGCGGTAA AGTCTTTCTG
ACAGACTATG TGAAAAAAAC CGGCGAAATC AAAAACGACC CCGGTGCCCG CAATGTCCTC
GATGGGCAGG AGCGGATTCG CTGCTTCAAT GAGGCCGACG GAAAGCTGCT CTGGGAGCAT
GCCTACGATG CGCCGTATTC GATTTCTTAT CCATCAGGCC CGCGTTGTAC CCCCACAGTC
GATCGAGATC TGGTGTACGC CCTGGGTGCA GAAGGAGAAC TCACCTGTTT GCAGGTTCAA
GATGGCAAAG TCCTCTGGAG CAAGAACTTC AAGAAAGATT TCGGAGTCGA AACCCCCATC
TGGGGATTCT CAGGACACCC ACTCGTCGAT GGCGATCAAC TGATCTGTGT GGTCGGTGCG
AAAGACGGAC TCCTGATCTC GTTCGATAAA AAGACAGGAA CAGAAAAGTG GAGATCACTC
AGCGCTTCTG AGCCAGGTTA CGGTTCGCCC GTCATCATTG AAGCAGGCGG TGTCCGGCAA
CTCCTCATAT GGACACCCGT AGAGATTGCT GCCGTCAATC CTTCCAATGG GAATGTCTAC
TGGAAGGAAC CACTGCAGCC CGACTACGCC ATGTCGATCA TGGCTCCGCA GAAATCGGGT
GATTTTTTGT TCGCCAGTGG CATTGGCAAT GTGGGGGCTG TCTATGAACT TGACCGCACC
AGACCAGGTG CCAAACTTTT GTGGCGAGGC ACCAATAAGA CCGCCCTCTA TGCCGCCAAC
GCGACTCCAC TCATTGTCGA TGGAGTGATT TACGGCTGCG ATTGCAATAC CAGCCAGTTT
CGAGCCGTAG AACTATCGAC TGGCAAAAGG CTGTGGGAGA CGTTCGCTCC CACGACGAAT
GAACGCCGTG CGCGGCACGG CACAGCGTTT CTTGTACAGA ATGGGGACCG TTACTTTCTG
ATGAGCGAGA CGGGTGAACT GATCATTGCT CAGCTCTCAG CCCAGAAGTA TGACGAGATC
AGCAGAACCC GGATTCTCGA ACCCACGGGT GAAGCCTTCG GAAGACCTGT CGTCTGGTCG
CATCCGGCGT TTGCCAACGG CCATATCTAC GCCAGGAACG ACAAAGAGCT GGTGGCTGTC
GATCTGCGTG ATCACGCCAA GTGA
 
Protein sequence
MKQQVFLRGL VVFATALLLT LPGMTNAEDW PQWMGLNRDG RWHETGLLRE FPADGAKFAW 
RVPVGMGYSG PAVAGGKVFL TDYVKKTGEI KNDPGARNVL DGQERIRCFN EADGKLLWEH
AYDAPYSISY PSGPRCTPTV DRDLVYALGA EGELTCLQVQ DGKVLWSKNF KKDFGVETPI
WGFSGHPLVD GDQLICVVGA KDGLLISFDK KTGTEKWRSL SASEPGYGSP VIIEAGGVRQ
LLIWTPVEIA AVNPSNGNVY WKEPLQPDYA MSIMAPQKSG DFLFASGIGN VGAVYELDRT
RPGAKLLWRG TNKTALYAAN ATPLIVDGVI YGCDCNTSQF RAVELSTGKR LWETFAPTTN
ERRARHGTAF LVQNGDRYFL MSETGELIIA QLSAQKYDEI SRTRILEPTG EAFGRPVVWS
HPAFANGHIY ARNDKELVAV DLRDHAK