| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0206 |
|---|
| Symbol | |
|---|
| ID | 9136861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 266746 |
|---|
| End bp | 267804 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003628257 |
|---|
| Protein GI | 296120479 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAC GGGATTTGCC ACTCCTGCTG GTGACAGGGA CAACTGGACT GGTCGGTCGG
CATGTGGTGT TGTGGGCCGC TAAAAATGGC TATCGCGTAC GGGGACTGGT TCGTAAGCCG
TCGTCGTGTG CCGGTTTCTT TCCGGAAGAG TTGATGCCGG TGATTGAATT GGTGGAAGGA
GATCTGGAGG ACGGCGTCAG CCTGGAAAAG GCCGTTCAGA ATGTCAACTT CATTGTCCAT
TGTGCGGCCA AAGTGGGCGA CTGGGGCCCG ACGGAAGAGT ATCGCCAGGT GAATGTCGAA
GGGACACGAC TGCTGATCGA AGCGGCACGG AAACAGCCGG CGTTTGAGAA GTTCGTGCAC
ATCAGCTCTT TGGGTGTCTT CCCGGCAAAA GATCATTACG GAACCGATGA GGATGTCCCG
GTCAGCACTT CCGGGATCGA CGGCTACACA TTGACCAAGC GGGAGTCTGA ACAGCTCGTC
AGCGATTACT CGCAGAAAGA AAAGTTTCCG GCAGTGATCC TGCGCCCTGG ATTTATCTAT
GGCCCGGGCG ATCGCTCAGT TCTGCCAAGG CTCATTGAGA GGCTTAAGAC AAAGCAGTTC
GCTTATCTGG GTTCGCCCGA AAAACTGATG AATAACACTT CGGTGCACAA TCTGGTGCAG
GCAGTCGCGA CTGTGCTGAA ACACACGACA CCCGCGGGAA GAATCTATCA TGTGACTGAT
GGTCGGCTCG TCACCAAGCG TGAGTTTGTC GAGACCGTGG CCCGATGTGC GAAACTGCCT
TTGCCGAAAA AGGTGGTTCC TTTGCCTGTT GCAAAAGTTC TGGCCAAAGT GCTGGAGCGT
ATCTGGAAGC TGCTTGGTAA GCAGGAAGCT CCGCTGCTCT CGAGCGCGCG AATCAAATTT
CTGGGATTGA ATCTCGACTT CAGCTCACAT CGTCTTCAGA TGGAACTTGG TTACCAGCCT
GTGATCGATT TTCAACAGGC GATGCCAGCC GCCGTGGCTG ATCTTTGTGG TGCACCTGCT
GAAACTTTCG TGGAACCACC TCAGCGGAAG ATTGCCTGA
|
|---|
| Protein sequence | MDQRDLPLLL VTGTTGLVGR HVVLWAAKNG YRVRGLVRKP SSCAGFFPEE LMPVIELVEG
DLEDGVSLEK AVQNVNFIVH CAAKVGDWGP TEEYRQVNVE GTRLLIEAAR KQPAFEKFVH
ISSLGVFPAK DHYGTDEDVP VSTSGIDGYT LTKRESEQLV SDYSQKEKFP AVILRPGFIY
GPGDRSVLPR LIERLKTKQF AYLGSPEKLM NNTSVHNLVQ AVATVLKHTT PAGRIYHVTD
GRLVTKREFV ETVARCAKLP LPKKVVPLPV AKVLAKVLER IWKLLGKQEA PLLSSARIKF
LGLNLDFSSH RLQMELGYQP VIDFQQAMPA AVADLCGAPA ETFVEPPQRK IA
|
|---|
| |