Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0186 |
Symbol | |
ID | 9136840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 240918 |
End bp | 242204 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | protein-L-isoaspartate O-methyltransferase |
Protein accession | YP_003628237 |
Protein GI | 296120459 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000467688 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTCACG TTCAACATCG GGAATGCAAA CTTCCTTCGA TATCAACTCG GCTCCAGAAG ACGGATTTGC CAGCCGTTTT CTTGGCGATG GTGACGTTGT GGCTGGGTTT GGAACTGCCG CCGGTTTTCG CACAGCCGCG TGACCCGTAC CTGGCACCCC GGCATCAGAT GGTCACCGAG TTCATTGAAC GCGAAGGGGT CAAGAATCCG CGTGTGCTCT CGTCGATGCG TCAAGTGCCT CGTCATGAGT TCGTGTTGCC GACTCAAAAG CAGCAGGCCT ATTTCGACCA GGCCATGCCG ATTGGCCATA AGCAGACGAT TTCTCCCCCT TACATTGTGG CCTATGAGAC CGAAGCCATT GATCCACAGC CGACCGATAA GGTGCTCGAA ATCGGGACGG GAAGTGGCTA TCAGGCGGCT GTGCTTTCAA ATCTGGTGCA GGAGGTCTAC ACGATCGAGA TTGTGGAGCC ACTAGGAAAG ACCGCCGCCG AACGTCTGAA AAGGCTGGGC TATAACAATG TGAAGGTGAA GGTGGGCGAT GGCTACCAGG GGTGGGCCGA GCATGCCCCG TTCGACAAAA TTCTGGTGAC CTGCTCCCCC GAGGATGTAC CCAAGCCGCT GGTTGATCAA CTCAAGGAAG GTGGCAAAAT GATCATCCCC TTAGGAGAAC GATACCAGCA GGTCTTTCAT CTCATGGAGA AGAAAGACGG CCAGATGATC AGCCAGAAGC TGATTCCTGT GCTGTTTGTC CCGATGACCG GTGCCGCCGA AGATGAGCGC AAGGTCAAGC CTGATCCCAT GCATCCTCAA CTGGTGAATG GCGACTTTGA AACGGATGAA AACAATGACG GCATGGTCGA TCACTGGTAT TACCAGCGAC AGGTGAAGCT CGAAACGGCC GACGTACATG GTGGCAAAGT GGCCGTGACG CTCAGTAACA GCGAGCCCGG TCGTATGGCG CAACTGGTGC AAGGGATGCC TGTCGACGGG ATTCGTCTGG GGACGATGGA TGTCAGCTTA TGGGCCAAGG CCAAAGGCTT GCGGTCGAGC CGGGATGGGA ACGAGCGGCC CGAGCTATCG GTGATTTTCT TTGATGACCT CCGCCGGACA GTGGCCGAGG TCAGCGTGCC GATCTCGACG GGAACTTACG AATGGCAGGA GTTTCGCAAG AGCTTTGCCA TTCCCACCAA AGCCCGGGAA GCCATCATTT TTATGAGCCT TCAAGGAGCG ACAGGCGACT TAACGATCGA CGACCTGCAG ATTCGCACAC CGTTTCGGAA GCCGTAG
|
Protein sequence | MPHVQHRECK LPSISTRLQK TDLPAVFLAM VTLWLGLELP PVFAQPRDPY LAPRHQMVTE FIEREGVKNP RVLSSMRQVP RHEFVLPTQK QQAYFDQAMP IGHKQTISPP YIVAYETEAI DPQPTDKVLE IGTGSGYQAA VLSNLVQEVY TIEIVEPLGK TAAERLKRLG YNNVKVKVGD GYQGWAEHAP FDKILVTCSP EDVPKPLVDQ LKEGGKMIIP LGERYQQVFH LMEKKDGQMI SQKLIPVLFV PMTGAAEDER KVKPDPMHPQ LVNGDFETDE NNDGMVDHWY YQRQVKLETA DVHGGKVAVT LSNSEPGRMA QLVQGMPVDG IRLGTMDVSL WAKAKGLRSS RDGNERPELS VIFFDDLRRT VAEVSVPIST GTYEWQEFRK SFAIPTKARE AIIFMSLQGA TGDLTIDDLQ IRTPFRKP
|
| |