Gene Plim_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0173 
Symbol 
ID9136827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp227768 
End bp228397 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content54% 
IMG OID 
ProductATP synthase F1, delta subunit 
Protein accessionYP_003628224 
Protein GI296120446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0955649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAGAGC CACTCGTAAC AAGAATCCCC TCAGTTCTGG ACGATCCTTC GTCTCTGGGC 
GTGGCTCGTG TTTACGCAGA AGCATTGCTT GGGGCTGCCG GTGATCAGGC CAGCGAAGTT 
GTCGAAGAAC TCGAGCTGTT CACGAAGACC TTGCTGAATG GTTCGACGGG GCTTGAAGAG 
GTTTTTGCGA ATCAGGCTTT GGGTCGAGAT GAGAAACTGG CGTTTGTTGA AAAGACCTTT 
ACAGGACGAG CCAGTGAAGT CCTGGTGAGA TTTTTACAGG TTCTGGCCCA ACATGACCGG 
CTCGACCTCG TGCGAGCAGT GAGCCATGTG GCCGCATTGG AATTGCAGAA GAAATTGGGG 
CGTAAGCAGG TGCAGGTGAC CAGTGCGGCA CCGCTGAGCC CTCAAGAATA TGAGGCGGTT 
GTCAATCGCC TGAAAGAGAC TTTAGGCCTT GAACCTCAGG TGGAAGTCAA GGTCGATCCG 
GAATTGGTAG GCGGTCTCGT GGTCCGTGTC GGTGACATGG TCTACGACGG TTCGCTGCGA 
ACACGGCTTG AACAACTCCG CGCTCAGTTG CGCGAAAGGT GTCTGAATGA AATTCAACGC 
GGACGAGATC GCTTCTGTTA TTCAGCGTGA
 
Protein sequence
MQEPLVTRIP SVLDDPSSLG VARVYAEALL GAAGDQASEV VEELELFTKT LLNGSTGLEE 
VFANQALGRD EKLAFVEKTF TGRASEVLVR FLQVLAQHDR LDLVRAVSHV AALELQKKLG 
RKQVQVTSAA PLSPQEYEAV VNRLKETLGL EPQVEVKVDP ELVGGLVVRV GDMVYDGSLR 
TRLEQLRAQL RERCLNEIQR GRDRFCYSA