Gene Plim_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0125 
Symbol 
ID9136779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp171841 
End bp172326 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content53% 
IMG OID 
Productmetal-dependent hydrolase 
Protein accessionYP_003628176 
Protein GI296120398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAA TGATTACCTC TGCCCAGATT GACGCCTATG TGGCTGGTGG TGCGAAGCTG 
ATCGCTGCCT TCGATGGTTT AACCAAGGCC GATCTGCAGG CGGTCCCAGT CCCAGGAACC
TGGAGCCTGC AACAGATTGC GACACACATT TACGATAGTG ATCTGATCGG AACAGATCGC
ATGAAGCGGA TAGCGGCCAT GCCCAACCCG CTGATCTGTG CGTACGATGA ATCGGCCTTC
AATACCTTGC CAGGCATGGA AGCGATTGAT GCTCTGGCAG CCTGCAAAGC TGTTGCGAAC
AATCGGCAGT TCATGGCCGA ACATCTGCGG CGATTCTCTC CCGAAATGTT TGCCCGGACG
GGGATTCATA CCGAAGTAGG CAAGGTGTCG CTGGCAGATC AGGTCATCAA GTACATTCAC
CATCTGGAGC ATCATCTGAA GTTCGCTCTG CAAAAGAGAG CACTTCTGGG TAAGCCACTG
GCATGA
 
Protein sequence
METMITSAQI DAYVAGGAKL IAAFDGLTKA DLQAVPVPGT WSLQQIATHI YDSDLIGTDR 
MKRIAAMPNP LICAYDESAF NTLPGMEAID ALAACKAVAN NRQFMAEHLR RFSPEMFART
GIHTEVGKVS LADQVIKYIH HLEHHLKFAL QKRALLGKPL A