| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0119 |
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| Symbol | |
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| ID | 9136773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 162257 |
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| End bp | 166942 |
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| Gene Length | 4686 bp |
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| Protein Length | 1561 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | PAS sensor protein |
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| Protein accession | YP_003628171 |
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| Protein GI | 296120393 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCGA ACTTAGATCG CGAGGACGTT CGGAATTCAG CCCCCTCGCT GCCACTACTC
GATTTGCTGG CCGCCGTAAG CGAAGCGTCG CTGGATGCAC TGTTTGTGAA AGACAGCTCC
GGCCGGTACT TGTTTTGCAA TGCCGCTGGA ACAAAGCTCA CGAATCGGAC ACGCGAGCAA
ATCCTCGATC AGGATGATAC CGCCGTATTC GGTAGTGACA CGGCGCGCAT CATGCGGGCG
CAGGACCAGC GAGTCATGCA ATCGGGTCTT CCGGCAGCGG AGACGCATGT CGTCCAAATC
GGAGATAATC TTCGCTCAAT CCAGATGACG ACTAAGCCGT ACCAGGATCA ACACGGTACG
GTACAAGGCG TGATCGTGAT TGCACGGGAC TTTGCGGATG CAGCGATGGG GAATCGTTCG
CATACCGTTG GTGTCGCGGC AGCGAACCAT CTCGAGCGAA GCGGGGCGGA ACAGGCATTA
CGGGAGAGCG AACGCCAATT AGCGGACGCG CAGCGCATCG CGCGCATCGG TAGTTGGGTG
TGGGAGCCCT CGTCAGGCAA AGTCTGGTGG TCGCGCGGCG TATTCGCGTT GTTTGGTGTC
GATCCACAAG TCGTTCAGCC CAGCTTTCAA GCGTTCCTGC AACTGCTGCA TCCCGATGAC
CTTCCGACGG CTGTCGCGCG GGTTGACGCG ATGCTCGCGG GTGCCGATCG CTTTGAAGAT
GATTTGCGCA TCATCCGTCC TGACGGGCAA ATGATCTGGC TGCACAGTCG GGCTGTCGCC
ACGCGCGATG CTGACGGCAA CATTCTCCGT GTGGAAGGGA CGGATCAGGA CATCACTGCC
AGAAAACTCG CCGCGGCGGA AGTCCAGGCC AGCCAGAAAT TCGTGAAAGC CGTCGCTGAG
ACATCCCCCC TGACAATTTA CGTGTTCGAC CTACAGCAGC AGAGTATCAC TTATTCGAAC
TATTATCTCA TGCGGGATCT GGGTTTCACC CCAGAAGCGA TCCAAGGCCG GAGTTGGGCT
GAACTGGCGG AACTGGTACA TCCGATTGAT TTCGCCAACG TGACGACGCT TCTCCAACGC
TGGGACACCG TCGACGATCA ACAAGTCCTG CTCGCGGAAT ATCGCCTGCA GGATGTCCAT
GGCAACTGGC GTTGGTTCGT CAGCCGGGAT CGGGTTTTTG AGAGAACGCC TGACGGTCGG
GTCAGCCAGA TCATCGGCAC GGCCGAGGAT ATCACTGAGC GCAAGCGGGT CGAACAATCG
CTCCGGGAGA GCGAACAACG ATTCCGCGAA TTGGCCGATG CCATCCCGCA AATCGTTTGG
GTCGCGGCGT TGGATGGCGG CTTGACGTAC CTGAACGCCA AGGCGACGGA GTACACCGGC
GTCGGGATGG ATCAGCTGAC GGGGTGGTCC TGGGAGCAGG TCATTCATCC GGAGGACGTG
CCGAACGCGA TTGAGCGTTG GACCGCGACT TTGGAGCAAG AACTTCCCAG AGACATCGAG
CTCCGGATCC GCCAGACGGA CGGAGCTTAC CGCTGGCATA TCAGTCGCCA GGTTCCCATC
CGAGATGCGT CGGGAGCCAT CGTGAGGTGG TACGGCACCT GCACCGATAT CGATGATTTG
AAGCGGACTC AAGCTGCGCT GCAGCAGAGC GAGTCGACTC TCGAAGAGGC CATGCGGATC
GGCGACATGG GGAGCTGGAT CATCGACCTG GTGCAGAATC GGGCCACCTG GTCTGATGAA
GGCTTCCGAC TGCTGGGATA TGTTCCGGGA GTGGACCAAC CTTCCCAGGA GCTCTTTTTA
AACGGGGTCT ACCCAGCAGA CCGTGATACC GTGCGTCATG ATCTGGCGAA TGCGATCGCC
ACGCAGACTT CGCTCAATTC GGAGTTTCGC TTTGTCCGAC CCGACGGCCA GCTACGCTGG
CTCCATTCCA GGGCCCGCGC CACCTCTGAT CAGCATGGGC GACCCATCCA ATTTGTGGGT
GTTACTCAGG ACATCACCGC CCGCAAACAA GCCGAACTGG CGCGACTCGA AGTCGAAGAA
CGCTACCGCC TGGCCATCCT CGCGACAAAT GATCTGATCT GGGATCTCGA CCCGGTCGCA
GGGACCGTTG CCTGGAGCGA GCAATACGCG GCCACCTTAG GACGAACGCC AGAGTCCAGC
GATTCCTTGC AGTGGTGGAT CGACAGGATC CATCCGGCAG ACCGGGAACG TACTGCCAGG
TCGTTGAGTG CTGCGGTGGA CGGGACCGCT ACTTATTGGA CTGCCGATTA CGAGTTCCTG
CGCGCGGACG GCGTCTGGGC CTCAATTCAT GATCGAGCGT ACATTGCGCG TGATGCAGCG
GGACATGCGC GCCGAGTCGT GGGGGCGATG CAGGATGTCA CCGATCGCAA ACGGGCTGAA
ACGGAGGTGC GGAGAACAGC GGAATTGCTG CGAGCGGTCG CGGAAGGCAC ATCGGATGCG
GTCTTCGTCA AGGACCGGGA TGGCAAATAT CTCCTCGCGA ACCAGGCGGC TTGCCAATTC
ATGGGCAAGC CGCTCGAGCA GGTTTTAGGA AGAGACGATA GCGAGTGGTT TGACGCCGAA
GGTGCCCGTC TGGTGTTGGA AGTGGATCGC GAAGTCATGC GGTCGGGCCT TGTTAGAACA
TCGGAAGAAA CGCTGACGGC GAATTATGTG ACACGGACCT ATCTTGCGTC GAAGGCTCCG
TATCGCGACG AACTTGGAAA TGTCATTGGA ATAATCGGCA TTTCTCGCGA CATCACGGCC
CGCAAGGAAG CCGAGCGGAT GTTGCGTTTA AATCAATTCA GCGTCGATCA CGCCGTGGAT
TCCATCTTTT GGATCAACGC TTCGAGTGAG ATTCTGTACG TCAACAATGC CGCCTGCCGC
ACCTTGGGCT ACACGCGCGA CGAGATGCTC GGAAAGACAG TACCGGACAT CGATCCGAAT
TTTCTGCCAG AAGCCTGGCC GGCCCATTGG GAAGAACTGC GGTGCCGCGG GTCATTCACG
TTCGAGTCCG ACCATGTGAC CAAGGACGGC CGCACTTTGA AAACCGAAGT CACCGTCAAC
TATCTGCAAT ATGAAGGCCA GGAATACAAC TGTGCCATCA TGCGTGACAT CTCGGAACGC
AAGCAGGCCG AGTTGGAGAT GCGGCAGTCT CTGTCGCGGA TGCGGGCCAC CTTGGAATCG
ACGGCGGACG GCATTCTCGT GGTTGACTTG GAAGGCCGCG TGCTGGATTA CAATCGCCGC
TTCATCTCAA TCTGGAGATT TCCTGAGGAG ATGATCGCCG AGGCGAACAA GTCGGACATC
ATCGCATCAT CCGACCAACA TCAGGCCGTT CAGAAGATGC TCGCTCAATT GAAGGACCCG
GAGGGCTTTG TCCGCCGGGT ACAGGAGATG TACCAGAACC GGGAGGAATC CTCCTTCGAT
GTGCTGGAAT TCAAGGACGG CCGCATCGTC GAACGGTTTT CTCAGCCCCA ATGGATGGAT
GGACAACCGG TGGGACGCGT GTTGAGCTTT CGCGACGTCT CGGAACAGCG AAAGCTGGAA
GAGCAGTTGC GGCAGTCGCA GAAAATGGAA GCCGTGGGGC AGTTCGCGGG AGGCATCGCC
CACGATTTCA ATAACCTCCT CACGGTCATA AACTGCTATT GTGAGCTACT ACTGGATCAG
AAATCGCAGC CGCAGAATTG GCGGGAGTCC GTGCAGCACA TCCGCGACGA AGGACTTCGG
GCCGCACAAT TGACCAAGCA ATTGCTGGAC TTCAGTCGCC GCTCGCATTT CCAGCCGAGA
GTCATTCACT TGAATGATGT GATCGAGGGA TCGCAGAAAC TGCTGCGGCG ATTGATCGGC
GAACGAATCC AATTGATCCT GCATCTCGAT CCTCTCTTGC CTGCGATCAA GGCCGATACT
ACTCATCTAG ACCAGGTGCT GATGAACCTC GTCGTCAATG CACGGGATGC CATGCCCGCC
GGCGGCCGGC TGACGATTCG CACGAGCAGA CTTTCACCAC AGGACGCTCG ACAATTCTTA
ACGAACATTT CATTGGAGAC GCCCTACGTT CAACTCGAAG TTGCTGACAC TGGCATCGGG
ATGAGCGCAG ACGTCCAAGC CCGGATCTTT GAACCCTTTT TTACAACGAA GGAGATCGGA
AGTGGTTCCG GACTGGGGCT CGCCGTCGTC CACGGCATCA TGCAACAGCA CGATGGCCAG
ATCCATGTGA CCACAGAGCC AGGCGTCGGG ACGACTTTTC GATTACTGTT TCCCGGTGTC
GCTGAGGAAC CTCCGTCGGT GACAGCCAGC AAACAACCAA CCATCCGCCA TGGGGCGGAA
ACGATTCTGC TCGTTGAGGA CGAACCGGCA GTGAGAAAAG CGACGCGGCT GATGCTCGAA
TTACAGGGTT ATCGCGTCTT GGAAGCTGCG AATGGTCGAG AGGCGTTAGA TCTGGTACGA
ACGCTGCCTG ATCCAATCGA CTTATTAATA ACCGATGTCG TCATGCCGGG AATCGGTGGG
CGAGAATTAG CGGGAGAATT GCGATCGATG CATGCCGATC TCCCGGTGGT TTATATCAGC
GGATATTCAG AGAGTTTCGG TGCCCGCGGA GCATCATTAC AGCCTCATGA GGCCTTTCTC
CAAAAGCCGT TTACTCAAGC GGATCTACTC CAACAAGTCT ATACATCCAT CGTACGGGCC
TTGTGA
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| Protein sequence | MTANLDREDV RNSAPSLPLL DLLAAVSEAS LDALFVKDSS GRYLFCNAAG TKLTNRTREQ
ILDQDDTAVF GSDTARIMRA QDQRVMQSGL PAAETHVVQI GDNLRSIQMT TKPYQDQHGT
VQGVIVIARD FADAAMGNRS HTVGVAAANH LERSGAEQAL RESERQLADA QRIARIGSWV
WEPSSGKVWW SRGVFALFGV DPQVVQPSFQ AFLQLLHPDD LPTAVARVDA MLAGADRFED
DLRIIRPDGQ MIWLHSRAVA TRDADGNILR VEGTDQDITA RKLAAAEVQA SQKFVKAVAE
TSPLTIYVFD LQQQSITYSN YYLMRDLGFT PEAIQGRSWA ELAELVHPID FANVTTLLQR
WDTVDDQQVL LAEYRLQDVH GNWRWFVSRD RVFERTPDGR VSQIIGTAED ITERKRVEQS
LRESEQRFRE LADAIPQIVW VAALDGGLTY LNAKATEYTG VGMDQLTGWS WEQVIHPEDV
PNAIERWTAT LEQELPRDIE LRIRQTDGAY RWHISRQVPI RDASGAIVRW YGTCTDIDDL
KRTQAALQQS ESTLEEAMRI GDMGSWIIDL VQNRATWSDE GFRLLGYVPG VDQPSQELFL
NGVYPADRDT VRHDLANAIA TQTSLNSEFR FVRPDGQLRW LHSRARATSD QHGRPIQFVG
VTQDITARKQ AELARLEVEE RYRLAILATN DLIWDLDPVA GTVAWSEQYA ATLGRTPESS
DSLQWWIDRI HPADRERTAR SLSAAVDGTA TYWTADYEFL RADGVWASIH DRAYIARDAA
GHARRVVGAM QDVTDRKRAE TEVRRTAELL RAVAEGTSDA VFVKDRDGKY LLANQAACQF
MGKPLEQVLG RDDSEWFDAE GARLVLEVDR EVMRSGLVRT SEETLTANYV TRTYLASKAP
YRDELGNVIG IIGISRDITA RKEAERMLRL NQFSVDHAVD SIFWINASSE ILYVNNAACR
TLGYTRDEML GKTVPDIDPN FLPEAWPAHW EELRCRGSFT FESDHVTKDG RTLKTEVTVN
YLQYEGQEYN CAIMRDISER KQAELEMRQS LSRMRATLES TADGILVVDL EGRVLDYNRR
FISIWRFPEE MIAEANKSDI IASSDQHQAV QKMLAQLKDP EGFVRRVQEM YQNREESSFD
VLEFKDGRIV ERFSQPQWMD GQPVGRVLSF RDVSEQRKLE EQLRQSQKME AVGQFAGGIA
HDFNNLLTVI NCYCELLLDQ KSQPQNWRES VQHIRDEGLR AAQLTKQLLD FSRRSHFQPR
VIHLNDVIEG SQKLLRRLIG ERIQLILHLD PLLPAIKADT THLDQVLMNL VVNARDAMPA
GGRLTIRTSR LSPQDARQFL TNISLETPYV QLEVADTGIG MSADVQARIF EPFFTTKEIG
SGSGLGLAVV HGIMQQHDGQ IHVTTEPGVG TTFRLLFPGV AEEPPSVTAS KQPTIRHGAE
TILLVEDEPA VRKATRLMLE LQGYRVLEAA NGREALDLVR TLPDPIDLLI TDVVMPGIGG
RELAGELRSM HADLPVVYIS GYSESFGARG ASLQPHEAFL QKPFTQADLL QQVYTSIVRA
L
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