Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0100 |
Symbol | |
ID | 9136754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 134994 |
End bp | 138575 |
Gene Length | 3582 bp |
Protein Length | 1193 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | protein of unknown function DUF214 |
Protein accession | YP_003628152 |
Protein GI | 296120374 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACGTT CTGGAGCAGC CTCGCTTCGC CATTCACTGT TGATCAAGGC CAGTCTCCGT TACTACTGGC GAACCTCGTT GGCCGTCTGG CTGGGCGTCA TTGCGGCGAC AGCCGTCGTG ACGGGTGCAC TGCTGGTGGG TGACTCGATG CGTGGCAGTC TGCGGGCCAT GACGTTGCGC CGGCTGGGTG AAGTCGATGC TGTCATCACT GGGCCCCGGT TTGTTCGAGA AGATCTCGCC TCCCGATTGC AGGCGAAACT CAAAGATCAG GGCATCGAGA TCGCCCCAGG ACTGATCCTG CGCGGAGGTG TTGAACATCA ACAATCGTCG AAATCCGGAA CTGACTCGCT CGTTCGCCGG GCAGGGCAGG TGATGGCTTA TGGCGTCGAT GAACGGCTCT GGCCCTGGCT GGATCGATCT GCACCCGGCA CCAGCATTTC GTCAGCAGCT TCGCGAGTGG CACCTCCTGC TGGGCGAGAA GCTCTCATCA CCACGGCACT GGCTGAAGCA CTTCAGGCGA GGGCGGGAGA CACAATCACA CTCTGGGTTG AACTTCCGTC GGCGGTTCCC CGCGATACTC TGCTGGGACA GAAAGACAAC GATTCGCAGG AGGTCACGCT CACCGTTCGC GAGATTCTTC CTCAGGAGGT GACCCCAGCT CACTTTGGAC TGGCACCCAG CCAGCTCGAT CCCGTCAACC TGTTCATGAA TCTCAAGACA TTACAAGCGG ATCTGGGGTT GGGTGAAGTT CGGCCCAGCC GCCGGGATCC TCAAGGCTCG CCGGCCCGAG TCAATGCGAT CTTTTTTCAT GACTCCAAAG CGACTTCTCC AGAGAGTGCC TTGGCCTCAC AAGAAGACCG AGCCGCCGTT GAAGAGGCTT TGCGAAGTGT CATTTCCTTC AGCGATCTGC AACTTCGGGT CATCGATGAT TCTGCGATTG GGGGGCTGAG TGTTGACAGC GAGCGGATGC TGCTCGAAGA CCCGCTGGCC CAGGCCATTC AGTCAGCAGC CGACAAGCTG AAGCTGGCCA GTTCGCCAGT CATGGTTTAC CTGGCGAACT CGATTCGAAA AGTGGGTGGG GAACCCCGGC AGTACTCCAT GTACTCGACT GTCGCCGGGA TCAATGCGAA AGCGCTGGAA CCACCTTTTG GCCCATTCCC TCTTGTCGAG CCTATGGCAG TCGTCGGTGG TCAACCCGTG ACAGCGCTCA AGCTCTCCGG GCGTGGGGTG ATGATCAACA CTTATCTTGC AGAAGACCTG GGCGCAAAAG TCGGCGACGA GCTAGAACTG AAATGGCATC AGGTTGGGGC ACATGGCGAG CTTCCCGAAG AATCGGGACT GTTCACGGTC GAAGCCATCA CAAAGATCGA GGGGCCAGCC GCTGACCGTC ATCTGACTCC TGAGGTCAAG GGGATTACCG ATGTCGATTC GCTGTCGGAT TGGGATCAGC CTTTTCCGAT GAAGCTCGAT CTGGTGACGA CCCGTGATGA TGAGTACTGG GATCAGTACA AGGCCCTGCC GAAACTCTTC CTGTCGCTCC AGACCGCCCA GGAACTCTGG CCCAGCCGGT ACGGGACGCT GACATCGATT CGTCTGGCCT TGCCAACAGG CACTTCCCGC GAAGCGATCG AAACAGAACT TGTTTCACAA ATGGTTGAGC AGCTCGATAT GTCGGCGGCG GGCTTATCGC TCCAGCCACT CAAAGCCTAC GGTCTGAAAA CGGCAGCAGG AGCCACAGAT TTTACCGGAC TGTTTATTGG CTTCAGCTTC TTCCTGATTG TGGCCGCCTT GATACTCATC AGCCTGCTCT TCCGCCTCGG TGTCGAGCAG CGCACCCGCG AACTGGGTCT GCTGGCAGCC ACGGGATTCA CACCCACATC GATCCGCTGG CTGCTGTTGT GCGAAGGCTT CTGGCTGGCA TGCCTGGGTT CACTCATGGG CCTTGTGCTG GGAACCGCGT ATGCCCGGCT CATGATTTAC GGTCTCACCA ACTGGTGGAA GGGGGCGATT CGCACCAGTG CCATTGACCT GTATGTCCTC CCCGGCAGTC TCGTCATGGG AGCCGCGATT GCCATCGCCG GTGCGATGTT CAGCGTCTGG TGGGCACTGC GCGATCTCTC CCGGATCGAG ATCCGGGACC TCCTTGCCGG ACAGAGCAAC CTCTTCGAAG ATCAACCATC GAGGTATTCT CAGGCACGCT GGAAGGCCCT GACCAGTGGT GGAATCTCGG CTGTGATGAT CGTCATGCTG GTTGCCGGGG TGGTTCCCGC CAGTGAAGCC TTTGGCGGAT TATCGTGGCA GATCGTGGGA TTCTTCGTTT CCGGGATGTT ACTACTGGCG ACCTCTCTCT GGACGCTCAG TGCGTGGCTG GATCGGCCTG TGATCAGTGT CCTCCAAGGG AGTGGCTTGG CGGGGGTCAC CAGACTGGCA GAGCGAAATG TCACTCGAGC GAGGCAGCGC AGTCTGCTCA CTGTCGGCAT GATCTCCGCG GCGACCTTTG TGATTGTGAC GGTGGCTGCG GGGCAGAGAA ACCCTGCTGC CGACCGACCG ATGAAGTCGA GTGGGAATGG CGGCTTCGCT CTCGTGGGAG AATCGGCCAG TCCGATCCTG TACGACTTGA ATACACCCGC AGGGAGGCAA TCGCTCCAGC TCAAGTTCCC CGCAGGATCG AAAGAAGCCA GCCTGCTCGA TGCGATGCGG GCTTATCAGT TCCGCGTGAA GCCGGGAGAA GATGCCAGTT GCATCAACCT GTTCCAGGCG ACAGCCCCCA CGATTCTGGG TGTGCCGCGA TCATTCATCG AACGCGGGGG TTTTAAGTTT GTCGGTGCGA GAGAAGCGAA TCCGTGGGAG CTACTGCTGG GCACCAGTAC CGAAACGATC CCTGTGATTG GCGATATCAA CACTTTGCTC TATAGCCTCA AGAAAGGCCC CGGAGCCACG CTTCCTGCAC CAGAAGCACC TTCTGGTGCG CCCCCTTTGA AGATCGCCGG GATGCTCGAT GGATCTGTGC TGCAAGGTGT GCTACTGATG TCCGAGGAGA ACTTCCTGAG GCTCTATCCC GAGCAGAAGG GATTTGGGTA CTTTCTCATC GAACTACCAC CAGCCGACGA ACAACCCGCG ATCGATCTGC TGGAATCCCG TCTGGTAGAA TACGGTCTCG ACCTCGAACC GGTGGGTGTG CGGATCGCCC GGTTTCTGGC TGTGCAGAAT ACTTATCTGG CCGCCTTCCA GGCTCTGGGT GGCTTAGGAC TGCTGCTGGG AACCATCGGG CTGGCGACCG TCATGCTGAG AAATGTCTGG GAGCGGCAAG CCGAGCTTTC GCTGATGAGA GCAATTGGTT TTGGCAACGG CCTGATCACC CGCATGATTC TGTGCGAGAA TGCTCTGCTG CTGATCTGGG GGTTGTGCTT TGGAACGGTC GCGGCTCTGG TCTCGATGCT GCCTCAACTG CTCTCCGCCG GGGCAGATGT CCCATGGGTC ACAGGTGGCG TCTGGCTCCT GCTGGTCTTC GTGGTCGGAA TGCTTTCGGC CCTGGCTGCC GTGCGACTGG CTGTACGCCT TCCTCTCCTC GTGAGAGCCT GA
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Protein sequence | MSRSGAASLR HSLLIKASLR YYWRTSLAVW LGVIAATAVV TGALLVGDSM RGSLRAMTLR RLGEVDAVIT GPRFVREDLA SRLQAKLKDQ GIEIAPGLIL RGGVEHQQSS KSGTDSLVRR AGQVMAYGVD ERLWPWLDRS APGTSISSAA SRVAPPAGRE ALITTALAEA LQARAGDTIT LWVELPSAVP RDTLLGQKDN DSQEVTLTVR EILPQEVTPA HFGLAPSQLD PVNLFMNLKT LQADLGLGEV RPSRRDPQGS PARVNAIFFH DSKATSPESA LASQEDRAAV EEALRSVISF SDLQLRVIDD SAIGGLSVDS ERMLLEDPLA QAIQSAADKL KLASSPVMVY LANSIRKVGG EPRQYSMYST VAGINAKALE PPFGPFPLVE PMAVVGGQPV TALKLSGRGV MINTYLAEDL GAKVGDELEL KWHQVGAHGE LPEESGLFTV EAITKIEGPA ADRHLTPEVK GITDVDSLSD WDQPFPMKLD LVTTRDDEYW DQYKALPKLF LSLQTAQELW PSRYGTLTSI RLALPTGTSR EAIETELVSQ MVEQLDMSAA GLSLQPLKAY GLKTAAGATD FTGLFIGFSF FLIVAALILI SLLFRLGVEQ RTRELGLLAA TGFTPTSIRW LLLCEGFWLA CLGSLMGLVL GTAYARLMIY GLTNWWKGAI RTSAIDLYVL PGSLVMGAAI AIAGAMFSVW WALRDLSRIE IRDLLAGQSN LFEDQPSRYS QARWKALTSG GISAVMIVML VAGVVPASEA FGGLSWQIVG FFVSGMLLLA TSLWTLSAWL DRPVISVLQG SGLAGVTRLA ERNVTRARQR SLLTVGMISA ATFVIVTVAA GQRNPAADRP MKSSGNGGFA LVGESASPIL YDLNTPAGRQ SLQLKFPAGS KEASLLDAMR AYQFRVKPGE DASCINLFQA TAPTILGVPR SFIERGGFKF VGAREANPWE LLLGTSTETI PVIGDINTLL YSLKKGPGAT LPAPEAPSGA PPLKIAGMLD GSVLQGVLLM SEENFLRLYP EQKGFGYFLI ELPPADEQPA IDLLESRLVE YGLDLEPVGV RIARFLAVQN TYLAAFQALG GLGLLLGTIG LATVMLRNVW ERQAELSLMR AIGFGNGLIT RMILCENALL LIWGLCFGTV AALVSMLPQL LSAGADVPWV TGGVWLLLVF VVGMLSALAA VRLAVRLPLL VRA
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