| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0090 |
|---|
| Symbol | |
|---|
| ID | 9136744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 122511 |
|---|
| End bp | 124706 |
|---|
| Gene Length | 2196 bp |
|---|
| Protein Length | 731 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003628142 |
|---|
| Protein GI | 296120364 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTCGC GTGAGCGGAT TCTCCGCTGG CGATGGTTGA GCGTAGTGGT GGCCATCATC
ACTTTGCCTG GCCCAGGCTG CGCCCGCTAC CAGCCCACTC CCGCTGCGAA CATTGGTATT
GATACCTCGC ATTACGAGGC GATGGGCCGC AAGATCGAGT ATCCGAAAAT CGAAAAGGTT
TCGGACGAAC AGATTCTCGA AGCGACCAGT GCACCGATCT CGCTCAGCAG CGAAACACCG
ACAGAGTACC TTGATCTTTC TCTTGAAGAA GTTATGCGAC TGGGTCTGGC ACAATCCAAG
GCTTTCCGCG ATCTGGGCGG ATTGGTGCTA AGATCTCCCG AAATTGTGCG TACCAAGAAT
GATCCTGCCA TTGCACAGAC GGATCCCAGG TTCGGCATCG AAGCCGCACT CAGTGCATTT
GATGCGCAGG TGGCAGCCAG TGCCATGTGG GAGAAGAACG ACCGCGCATT GAACAACCAG
TTCTTTGGTG GTGGGACGCG GCTGCTTACT CAGGATTTCA ACGTCTATCA GGCTCAGATC
TCGAAAACAG CCGCGACGGG TTCGAATTTT GCCATTCGTA ACTACACCCA ATACGATGCC
AACAATGCAC CCGGGAACTT CTTCCCCAGC GCGTGGACAA CCTGGTACGA AGGTGAAGTT
CGTCAGCCAT TGCTGCAAGG CGCCGGGGTC GATTTCAATC GTATTGCCGG GCCGAATGCC
CAGCCTGGCC TGATCAATGG TGTGGTGATT GCCCGGATCA ATTCGGATAT CTCACTGGCT
GATTTTGAAG TTGGTGTCCG TAACTATGTG AGTGATGTTG AGAACTGCTA CTGGGATCTG
TCATTTGCCT GGCGTGATCT GGAATCGAAG ATCGCCGCCC GTGATGCGGC TCTCGAAACC
TGGCGTCGCA TTCGGGCTTT ATACGAGCAA GGTCGACGAG GTGGCGAAGC CGAAAAGGAA
GCTCAGGCCC GTGAGCAGTA CTTCCGCTTT CAGGAGGAAG CCCAGAACGC ACTGCATGGC
CGCTTGCTCG ATGGCACACG GACCAACAAC GGCAGTACCG GGGGGACCTT CCGCGGGACA
GGCGGGGTTT TTGTCTGCGA ACGCCGACTG CGTCTGCTGA TTGGTATGCC CATTAACGAT
GGTCGACTCA TTCGAACTGC CGACGAACCG TCGGCTGCCA AGCTTTCTTA CTCGTGGGAA
TCAACTCTCG GTGAAGCTCT TTCACGACGA GTTGAACTCC GCCGCCAGAA GTGGCAGGTT
CGCAAACGTG AACTCGAACT TCAGGCCAAC AAGAACTTTC TCAAACCACA ACTCGATGCC
ATGGCCCGCT ACCGCTTCCG TGGATTCGGC AAAGATCTGT TGCCAGACGG AACAGGTGGT
GAGTTTGGTG ATGCCTATTC AAACCTGACT TCGGGGAACT TCCAGGAGTG GCAGTTAGGC
CTCGAGTTCT CCATGCCTTT AGGATTTCGT CAAGCTTATA CCGCCGTTCG TAATGCGGAA
TTGCAACTGG CCCGAGATCG TGCGTTACTT TTCGAGCAGG AACGATCAGT CATCCACGAC
TTGAGCAACG CCATTGCCGA CGTGGATCGT TCCTACCAGA TCGTCGAAAC TGCACTGAAC
CGCCGCATGG CTGCACGAGA GCAGGTTGAA GCGGTTCAAG CGGCCTTTGA CGCCGACAAC
GCGACGGTTG ACCTGCTGCT CGAAGCTCAG CGTCGGATGG CTGATGCCGA CATTTCCTAC
TTCCGGGCCG TCATCGAATA CTCGCTGTCG ATCAAGAACG TCCAGCTCGA AAAAGGAACC
TTGTTCGATT ACAACGAAAT CTCGCTCGAA GAAGGGCCAT GGCCAGAACA AGCTTATTGC
GATGCTCTCG AGCGGCAACT GCGTACTCAC CCGGCCAGCC GGTTCGATCA TCCTAAACAG
TTGGCGCCAC AGGTCAGCGA AGGCCCGATG ATTCAGACTC TGGCACCGGC TCTGAATGAA
CCGCAGGGGA TGACCTATCC ACCGGTTGAG GGAGGCTCTG TCCTCTATGA TGACCAGGCC
ATTGATGCCC CCGGTTCACC AGAAGCCACA CAGCTCTTTG ACAAAGTTCT CTCATCTCCG
CCTCAGCCGG CAGGGAACTT GCCTGCGTTC ATCCCACCGG CCCCAGGGGC CAACGAGAAC
GAATCCAATC CAGAATTCGA TCCCGCATTC AAATAG
|
|---|
| Protein sequence | MWSRERILRW RWLSVVVAII TLPGPGCARY QPTPAANIGI DTSHYEAMGR KIEYPKIEKV
SDEQILEATS APISLSSETP TEYLDLSLEE VMRLGLAQSK AFRDLGGLVL RSPEIVRTKN
DPAIAQTDPR FGIEAALSAF DAQVAASAMW EKNDRALNNQ FFGGGTRLLT QDFNVYQAQI
SKTAATGSNF AIRNYTQYDA NNAPGNFFPS AWTTWYEGEV RQPLLQGAGV DFNRIAGPNA
QPGLINGVVI ARINSDISLA DFEVGVRNYV SDVENCYWDL SFAWRDLESK IAARDAALET
WRRIRALYEQ GRRGGEAEKE AQAREQYFRF QEEAQNALHG RLLDGTRTNN GSTGGTFRGT
GGVFVCERRL RLLIGMPIND GRLIRTADEP SAAKLSYSWE STLGEALSRR VELRRQKWQV
RKRELELQAN KNFLKPQLDA MARYRFRGFG KDLLPDGTGG EFGDAYSNLT SGNFQEWQLG
LEFSMPLGFR QAYTAVRNAE LQLARDRALL FEQERSVIHD LSNAIADVDR SYQIVETALN
RRMAAREQVE AVQAAFDADN ATVDLLLEAQ RRMADADISY FRAVIEYSLS IKNVQLEKGT
LFDYNEISLE EGPWPEQAYC DALERQLRTH PASRFDHPKQ LAPQVSEGPM IQTLAPALNE
PQGMTYPPVE GGSVLYDDQA IDAPGSPEAT QLFDKVLSSP PQPAGNLPAF IPPAPGANEN
ESNPEFDPAF K
|
|---|
| |