| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0084 |
|---|
| Symbol | |
|---|
| ID | 9136737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 114747 |
|---|
| End bp | 115634 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003628136 |
|---|
| Protein GI | 296120358 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.524917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA CTCAGGACAC TCCCGCCCCG CCAGATCAGC CTGACCCGCC ACATCGGCCC
AAAAGTCTCT GGCAGATCAT GCGGGGAGAA CCTGCATCAG ATTCTCTTTC TCACCCTGTC
GAAACCCAGG CAATAGATCC CGACGCTTTA CAGCCTCAGG CAACGGAAAC TGCTCTCGAT
ACTGAGAAGA TGATTCCCAC AGCCCGTGGT GCTCCGTCCC TCCGTGGCCT CTGGCATGTC
ATGCGGGAGC AGAAGCAGCC CCAGCGGCTT CCCGCCGTCC CTGCATTTCG ATCACTCCAG
CGCAAGCCTG CCCCAGCCAT CAACTCAGAT TCTGCTCCTT TGGCAGACGG TCAACAAGCG
GCTCCCCCGG CAACGGCAGA AAAAGTCCGT CAAGCCCGCT GGTATACCGC AGGCATGCAG
TTTCGTGCGT CCCGCCCGAG AGTCGCCAGG CGATATCCAC ATGTCGTTCG TCGAGGAACA
TCAGTCACCT CTCCCGCTGA TGATATGCAG ACCGGTTTGG ACGTCATTGC GCCAATACAT
ACCACAGAGT TGGAAGCTGA ACTCCTCTAC GAGCGACTGA CTCCCGTAAC CTCTGCCTGG
ACGTGGATCG GCCGGGGAGC CACATCGACT TTGGCCGCAT TTCTGTTCTC ACCACTGGCG
CAGTGGGAGA GCTTATGGTG GGAGCTCCCG GCGACAATCT TCGGGTTCGG CGGCCTGTTC
TGTGCCTGCC TCGCCATGAC CGAAGCCGAA AGGCGGTATC TTTACAGTGC CGGGCCTCAT
GGAGACCACG CCGCCAGGCA ATCCACAGAC ATTCAACTGG CGACAGCCGC CCTCCTGATA
CTAGCCGCCA CCACAAGCAT CTTCATCGGG CCATTCGTTT GGGGTTAA
|
|---|
| Protein sequence | MAETQDTPAP PDQPDPPHRP KSLWQIMRGE PASDSLSHPV ETQAIDPDAL QPQATETALD
TEKMIPTARG APSLRGLWHV MREQKQPQRL PAVPAFRSLQ RKPAPAINSD SAPLADGQQA
APPATAEKVR QARWYTAGMQ FRASRPRVAR RYPHVVRRGT SVTSPADDMQ TGLDVIAPIH
TTELEAELLY ERLTPVTSAW TWIGRGATST LAAFLFSPLA QWESLWWELP ATIFGFGGLF
CACLAMTEAE RRYLYSAGPH GDHAARQSTD IQLATAALLI LAATTSIFIG PFVWG
|
|---|
| |