Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0077 |
Symbol | |
ID | 9136730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 104138 |
End bp | 105877 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003628129 |
Protein GI | 296120351 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAC TGGAACCCAT CATTCGCAAT CGCTTCTGGA TCCTCAGTGG ACTGGTCGTG ATTTTGAGTC TCGCTGGCTG GTGGATGGCT TCGTCTTCAC TGGCGACGAC GATTGATACA CGGACAAAAG AAATCAAAGC TGCTGAGGAC AAGATCCCCA AGGGAAATGT ACCCAGTGCG GATTACTCGA ACAAACTCTC GACAATCAAC ACGTATCAGG AGCGGCAGGT CGAACTTGCG CGGACGATGC TCTGGGATCA ACAGCGGGCC AAAATGGCAT GGCCCAAAAA TATTCAGCCC TATGCTGATG AAGCGGGTTA TCGCGGCGAG TTCGCACCTC TCGCCCGGGA TATCTATCGC ACCAGTTCAC CATCAGATAT TGCCTCCGTC TGGCAAAAGG TTCGCCCTTT CAATGCTCAG ACTGGTGAAG GCGTCGTCGT CTTTCCACTG CAGGCGATGC CGGTGAAATA CTGGCGTGAT CTCCCTCCAA CCTCCAAGGA AATGTGGGAT GCTCAGGAAG ACCTCTGGCT CCTCGATTCT CTCCTGAGCA CGATTACTCA ACTCAATGGG GGTGAAACCA CTAACAATCG GCTGGATGCT TCCATTCATC AGATTCTGAA ACTCCAGTTG ATGGGTGGTA AGCGTGGTGA GCCCATCGAT GCCCCTGCCG CTGGTGGCGA TCCATCAGGA GGTGGTGGAG AAGGTTATTC CCCACCTATG GCAAGTGGTG GCGATGCTTT TTCCAGTGGC GGTGGTGGGC GTGGTGGCAA GATTGCCCCA CCAGCCAGTG CCGATTTCCC CATTAAGGAA GAGTTTGGCT CAGCCGGTGG CGAAGGGGGC CTGAATGGCA GCTCATCTTC GGCTGATTCA TTTGCTGCCG ATCCCTCCGC GCTGGGTGAT GGGGCTCCGC AAATGGCAGC CGCTCGACGT TACATTGATG ACGACGAAGG TGCACCATTT CGCACGCGAG GATTTTATCT CTCCGTGCTG ATGGATCACC GCCGCATTCC CGATTTCATC GCGGAGTTGA CAAGTAACGA ACGCTCGGTC TGGCCGGTGG AAGTCGTTCG TGTGCAGATG ATTCGCAAGA ATGAGGATGG CAACTTTGCC CGCGGCGGGG CCTCAGGCAT GCCGAATTAT GGCGCAGAAG CCGGGAGTTT TGGCGGCTCT TCGCCTACGT TTGGAACAGC ATCGGAAGGG TTTACCGGCG GAGGAGCGAA CAGTGTTCCT CCGGAATTCC TGACACAATC CCAGGGCATC AATCCACAGG ATGCCAACAA TCCGATGCTG ATGAACAAGA TTCAGGCGGC GAATGCAGCT CTGCAAACGG CACTGACTGA TCCGAATATC GCCGAAGTTG TGATTGCCGG TTATTTCACG CTTTACAATC CGCCCCAGAC AGCGCCAGAG GCAGCAGCAG CGACATCGGC AGATTCCACA GCAGCACCAG CGACACCAGC AGCACCAGCA ACTTCTGAAA CACCAGCAGG TACCGAACCG ACCACGCCGG AAATGACGAA CCCAGCACCG GCGGAAAATC CCCCGGTGGA TGGTGCCACA CCGGCTGCAC CCGCAGCACC TGTTAATCCC GCGCCGACAG ATCCAGCAGC GACTCCGCCT GCGAACACTC CCCCGGCAGC ACCAACAGCT CCAGCAACGA CACCAGCAGC ACCAGCTGGT GAACCGGCTG CGCCAACTGG TGAAGCAGCG CCGGCTACTC CACCAGCCGG TGGAACTTAA
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Protein sequence | MEKLEPIIRN RFWILSGLVV ILSLAGWWMA SSSLATTIDT RTKEIKAAED KIPKGNVPSA DYSNKLSTIN TYQERQVELA RTMLWDQQRA KMAWPKNIQP YADEAGYRGE FAPLARDIYR TSSPSDIASV WQKVRPFNAQ TGEGVVVFPL QAMPVKYWRD LPPTSKEMWD AQEDLWLLDS LLSTITQLNG GETTNNRLDA SIHQILKLQL MGGKRGEPID APAAGGDPSG GGGEGYSPPM ASGGDAFSSG GGGRGGKIAP PASADFPIKE EFGSAGGEGG LNGSSSSADS FAADPSALGD GAPQMAAARR YIDDDEGAPF RTRGFYLSVL MDHRRIPDFI AELTSNERSV WPVEVVRVQM IRKNEDGNFA RGGASGMPNY GAEAGSFGGS SPTFGTASEG FTGGGANSVP PEFLTQSQGI NPQDANNPML MNKIQAANAA LQTALTDPNI AEVVIAGYFT LYNPPQTAPE AAAATSADST AAPATPAAPA TSETPAGTEP TTPEMTNPAP AENPPVDGAT PAAPAAPVNP APTDPAATPP ANTPPAAPTA PATTPAAPAG EPAAPTGEAA PATPPAGGT
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