Gene Plim_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0072 
Symbol 
ID9136725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp95821 
End bp96777 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003628124 
Protein GI296120346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0793398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAG TTTCTGGCGG TTCCACCCGT CGCTCTGGAT TTACTCTGAT TGAACTCCTG 
GTGGTGATTG CGATCATCGC CATCCTGATT GCACTGCTGT TGCCGGCAGT TCAGCAGGCA
CGGGAAGCGG CCCGCCGCAC CCAGTGCAAA AACAATCTCA AGCAGGTGGG GTTGGCGATG
CACAACTACC ACGACACCCA CAACACGTTC CCACCGGGGA ATATTCGTGG AGCCCTCAAC
GTTGGTCACG GACCGACCGC CTGGGTACAC ATCCTGCCTT ATGTTGATCA GGCTCCGCAG
TACAACAGAG TCAACTTTTC GACTCCAGGC ACATGGTGGG GCGGAACAGC TGGACCACCC
GTTGGCGGCC CGCACGGCGC GACGTGGAAT GGTTTTATTG TCAACGGATT CATCTGTCCT
TCGTCACCAC TTGTTTCGAG AAACTCCTAC AATGGCGGCC AGAACGTCTG GCAACGTGCC
AGCTACACGC TGATTGAAGG TGCTGTTGGT CTGAATGAAG TCGCAAACAA CGGCAATGGA
ATTCGGTCAA ACGGAGGTAT GTTTACCCGC GACCGAAATT TCAACTTCCG CGACATGACC
GATGGCAGCT CGAATATTGT GATGGTGGCT GAGCAGTCGA ATTGGGGGCG AGATGCTGCC
AATACCAACA ATGTCGAGTA TCGATCCGAT GGTGGTGACT CTGTCTGGAT GGGGACAGAT
TATGGAAACC GTTGTTTTAA CACGACCACT GTGCGGTATG CGATCAACAC TCGCAGTAAT
GCTCTGAGTG GTTCAGGATC ACAGAGTTGC AATACACCGA TCCAGTCGGC CCATACCGGC
GGAGCCCATG TGCTCATCGG TGATGGGACC GTTAAGTTCC TGTCCGAAAA TATGAACTTC
GACACGCTCC GGTTCTTGGC AGATCGTGCT GATGGCAACG TAGTCGGTGA GTTCTAA
 
Protein sequence
MAQVSGGSTR RSGFTLIELL VVIAIIAILI ALLLPAVQQA REAARRTQCK NNLKQVGLAM 
HNYHDTHNTF PPGNIRGALN VGHGPTAWVH ILPYVDQAPQ YNRVNFSTPG TWWGGTAGPP
VGGPHGATWN GFIVNGFICP SSPLVSRNSY NGGQNVWQRA SYTLIEGAVG LNEVANNGNG
IRSNGGMFTR DRNFNFRDMT DGSSNIVMVA EQSNWGRDAA NTNNVEYRSD GGDSVWMGTD
YGNRCFNTTT VRYAINTRSN ALSGSGSQSC NTPIQSAHTG GAHVLIGDGT VKFLSENMNF
DTLRFLADRA DGNVVGEF