Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0068 |
Symbol | |
ID | 9136721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 89058 |
End bp | 90866 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003628120 |
Protein GI | 296120342 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTGA AAGTTCGTTG CAAGGCTTGT GGGACAGTCG TCACGGCACC GGATGCGGCC CGTGGCAAGG CGATTCGCTG CCCCGACTGT GAATCGAAGA TTCCTGTCCC CGCGGGCGAT TCGAAAGCCA CAGCCAGCAA AAAGGGAGCA TCTGCCAAGT CGTCAAAATC GGCTTCCGGC GAGGACGGAC TGGCCAATCT CGATTTGAGT GATCTGGAAG ATTCCGGAGC CAGCATCTGT CGCAAATGCG GGACAGAAGT TGATCCTGAA GCGACCGAAT GCCCGAATTG TGGGATCGAT CTGGCAACCG GTGGTTTGGG AGAAACGGCT CGCAAGAAGC AGATGAAAGG GCCAGACCCG GACAAATTTT ACGAAAATCT CTGGTCGGAG AGCTGGAAGT TTGCGCTCAA ATACAAGCTG TTTGCCTTCC GGACGATGAT GTACCTGCTG GTTTCGTCGA CCATCATGTT TGGCAGCGCC TTCATGCTGC TCTGGGTTTC TTCGCCACCC CCTCGATACT TCTGGGGATT GATTGCCGTC GTTTCGGTCA TGGCCATTCC GGGATGGTTC TGGTTTCTGG ATACCGAAAT CATCAAGGCG ACGATGGAGC GGAAAGATAA GCTGCCGCGC ATCAACTTCG ACTTCTTTTT GTGCAGTTCC TTAGGCTTGC AGGCCGTGGC CTGGCAACTG GCTTTTGCAC TCCCTTTGCT GGCGGTTCCT TACCTGTTGG GGTGGTTTGT GATTGTGCCG ATGGAGGGTT TACCGCTCTC TGTTAAAATC GCCTATTTTC TCGCATGGCA GATTCCTATT GCCTCGCTAT TGCCAGCCGT CATGTCTCAC ATGTCGATGC CGGTCTCTTA TCCCGGGTGG ATGTTCTGGA AGCTCTTGCC AGGTTACTTC AAGACAATTA AAGCTTCGTG GACGTGGACA GGGATGTTCC TGCTCACGAA TCTCCTCCCG ATGATCTTTC TCGGATTGAT CATCGGGCTG TCGGCTGAAC CACTGGTCGA TCTGGCGAAA ACGATGGATA ACAACGGCCA GATTGTCTAC GCCAAGTGGC AGGTCGAAAA CAATCCGATC AAGGCTGATA AACCGGGTGG TGTGGCTCCG GCCAATCCGT TCGAAGCCAA GTCGAAAGAA GAGATCAAGC CACCGAACTA TTTCTCATTG ATCCTTCCTT CCGTCTTCTG GGTACTGGCC TGTTTGAGTG CGAGTTGGAC TGCCGTGTTT AACATGCGGA CCAATGGTCA GTTTGCTTAC TTCAACAAGA ATCGATTGGG GCTCATTGGC CGGGCCAAAG AGTACAAGTA TGTTGCTAAA GAAAAGACCG ATGAAGACGA GGTCGCCAAG CCGAAGGGTG TGGTCGATGC GGTGGCCGTT GTTATGGTCT GCGGCATTCT GGGAGCTGTC GGCGGCCTCG TCACTTCTTC ATTCGCAGAC CTGCCATTTC CTATGTTGCC CACTATGGCG TTTGGGGCTG CCTCTGGTTT TGCCCTGGCC AGCTTTATTG GCTGGTGTGT GATGCTGGCC CCTGCCTTCC GGGCCAGTAT GGCGATTGGC CTCTTGATGA TTTTCTTTCC GTTGATTGGT GCGATCCTCC TCTACAACAA AGAGCCCGAA GAAACCAAGT TTGGTTTGAC CGCCTTCCTG GGTGGAGCTT TGCTGGAAGG TATCGCCTTT GGTGTCTTCT TTGTGACTGC CATCAAAGCC GTCGTCGATG CACTCCCGCC ACCCGATCCA GCGGCTGGAG CAGCCCCTGC CCTCTGGCTG ATGAATCTGT CGAGCCTGGG CCACTGGTTC GGGTGCTAA
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Protein sequence | MPLKVRCKAC GTVVTAPDAA RGKAIRCPDC ESKIPVPAGD SKATASKKGA SAKSSKSASG EDGLANLDLS DLEDSGASIC RKCGTEVDPE ATECPNCGID LATGGLGETA RKKQMKGPDP DKFYENLWSE SWKFALKYKL FAFRTMMYLL VSSTIMFGSA FMLLWVSSPP PRYFWGLIAV VSVMAIPGWF WFLDTEIIKA TMERKDKLPR INFDFFLCSS LGLQAVAWQL AFALPLLAVP YLLGWFVIVP MEGLPLSVKI AYFLAWQIPI ASLLPAVMSH MSMPVSYPGW MFWKLLPGYF KTIKASWTWT GMFLLTNLLP MIFLGLIIGL SAEPLVDLAK TMDNNGQIVY AKWQVENNPI KADKPGGVAP ANPFEAKSKE EIKPPNYFSL ILPSVFWVLA CLSASWTAVF NMRTNGQFAY FNKNRLGLIG RAKEYKYVAK EKTDEDEVAK PKGVVDAVAV VMVCGILGAV GGLVTSSFAD LPFPMLPTMA FGAASGFALA SFIGWCVMLA PAFRASMAIG LLMIFFPLIG AILLYNKEPE ETKFGLTAFL GGALLEGIAF GVFFVTAIKA VVDALPPPDP AAGAAPALWL MNLSSLGHWF GC
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