Gene Plim_0067 details

Gene Information

• Locus tag: Plim_0067
• ID: 9136720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 86633
• End bp: 88777
• Gene Length: 2145 bp
• Protein Length: 714 aa
• Translation table: 11
• GC content: 55%
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_003628119
• Protein GI: 296120341

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGAAC TAGAATCCTC CGAGAACCAG CCCACTCAGT CTTCAACGAC GCCAGCGCCA 
GTGAAGTCAG AGATCGTGAA ATCAGAACCC GTAAAGCCGG ATCCTGTGAA GACCGAGCCA 
GCGAAACCTC TTGGCACAAA GCGAAAAGCT GAAAAACCAG GCTCTTCCAA CCTGGTCTGG 
TATCTGCTGA TCGCCATTGT CATTTCGATT GGTGTCTTCA CACTGGGTGG CAGTGGTAAA 
CGCACCACCG TCGAATTCAG CGACTTCAAA CAGCGATTGA AACAAGGCTC GTTGACTGCC 
ACGAATGTCT TCGAAGTGGA AATTGGGCCG ACATCGATTC GCTATCAGGA TCAGCCCGGC 
AACAAAGGTC GTGAAGCGAC CTCGTCGAAG CGGGTGACTC CGGCTTACTT TGTGGTGCCG 
GTCGTTGGGA TGCGAGATGG TGCCCAGACC AGCATTATTG AATTGCTGGA TAAAAACGGC 
ATCAACTACG GCTTCAGTGC CGAGCCCCCC GAATGGCAGA TGATGCTCTA TTATCTGGGA 
GTTCCCCTGA TTCTGCTGGC AGTCTTTTTG TATGTCTTCC GGAAAATGGC AGGCCCCGGG 
GCTGCGATGT CCTTTGGCCG GAGCCGGGGT AAGCTTTACG CTCAGGAAGA GATTGGAGTC 
ACCTTTCAGG ATGTGGCAGG GATCGATGAA GCCGTTGAAG AACTGCGTGA AGTCGTCGAG 
TTTCTGAAGA CACCCGAGAA GTACCAGGCT CTGGGTGGCC GCATTCCTCG CGGAGTTCTG 
CTCGTTGGGC CGCCGGGGAC GGGTAAAACC TTGCTGGCAA AAGCCGTAGC GGGTGAAGCA 
GGTGTTCCAT TTTACGGATT GTCAGGTTCT GACTTTGTCG AAATGTTTGT CGGTGTGGGA 
GCCGCCCGAG TTCGCGACAT GTTCCAGCAG GCTGGTGAAA GATCGCCAGC GATTATCTTT 
ATCGATGAAC TGGATGCGCT CGGCAAAGTT CGCGGAAGTG GCATGCCCGG CGGACACGAC 
GAGCGCGAGC AGACACTGAA TGCACTGCTG GTTGAGATGG ATGGTTTTTC CTCCGATCAG 
AGTGTGATCG TCATGGGTGC CACCAATCGA CCAGAAACGC TGGACCCCGC CTTAATGCGA 
CCTGGTCGAT TTGACCGCCA TGTGCTGGTG GATCGGCCCG ATGTCAAAGG GCGTGAAGCG 
ATACTTAAAG TGCATGCCAG CAAGGTCAAA GTTGACGATC ACGTCAACCT GAAATACCTG 
GCACGACTAA CTCCTGGTTT TGTTGGTGCC GACCTGGCGA ACCTGGTCAA TGAAGCCGCA 
CTTCTGGCGG CACGCGCCAA TAAACCCAAA GTGACCAATA TTGAGTTTGA AGAGGCTGTC 
GAGCGGATTG TGGCGGGGTT GGAAAAATCG ACCCGGATCA TGCCCGAGGA AGAGAAGAAT 
CGCGTGGCGT GGCATGAAAT CGGCCATGCA CTGGTTGCCT GTTCGCTGCC GCATGTTGAT 
CCCGTCCATA AAGTCTCGAT CATTCCCCGT GGTCTGGGAG CTCTGGGGTA CACACTCCAA 
AGGCCGGAAG AAGACCGCCA GTTGATTACC AAGACCGAAC TTCAGAACCG GATCTGTGTA 
TTACTGGGTG GTATTGCTGC TGAAGACATC GTATTCAACG AGAACTCCAC AGGGGGTTCC 
AATGATCTGC AGCGGGCGAC TGATCTTGCC CGCCGCATGG TGACTGAGTT TGGCATGAGC 
CCCAAACTGG GACGCGTGCA TTACAGCGAT ACATCCCGCT CGGCTTTTCT CGCGAATGCC 
GCCACTGTTT CTGAGAGTGC TCACAGTGAA GAAACCATTC GGGAGATCGA TCTCGAAGTC 
AGGCGCATCA TCGATGCGGC CTATGAGACA GCTCACGAGA TTCTCGTGAC TCGTCGGGCA 
GCGATGGATC ACCTCACGAG AGAGCTGCTG GAGATCGAGG TGATGGATGC AGAAAAACTG 
CAGCAGATCC TTTCTCAATA CCAGACCGGG CCACAGATTA TGCCGGGAAC GTCTGCACAG 
ATTTCGCCGA ACCCGACATC TTTGCCCACT CCTGCGGTTG CCCCTTATCG ACCGGGCGAG 
AGCGATGGCA GCAGCGAAGG TGGAAACCCA GTGAATGTCG GCTGA 

 

Protein sequence

MTELESSENQ PTQSSTTPAP VKSEIVKSEP VKPDPVKTEP AKPLGTKRKA EKPGSSNLVW 
YLLIAIVISI GVFTLGGSGK RTTVEFSDFK QRLKQGSLTA TNVFEVEIGP TSIRYQDQPG 
NKGREATSSK RVTPAYFVVP VVGMRDGAQT SIIELLDKNG INYGFSAEPP EWQMMLYYLG 
VPLILLAVFL YVFRKMAGPG AAMSFGRSRG KLYAQEEIGV TFQDVAGIDE AVEELREVVE 
FLKTPEKYQA LGGRIPRGVL LVGPPGTGKT LLAKAVAGEA GVPFYGLSGS DFVEMFVGVG 
AARVRDMFQQ AGERSPAIIF IDELDALGKV RGSGMPGGHD EREQTLNALL VEMDGFSSDQ 
SVIVMGATNR PETLDPALMR PGRFDRHVLV DRPDVKGREA ILKVHASKVK VDDHVNLKYL 
ARLTPGFVGA DLANLVNEAA LLAARANKPK VTNIEFEEAV ERIVAGLEKS TRIMPEEEKN 
RVAWHEIGHA LVACSLPHVD PVHKVSIIPR GLGALGYTLQ RPEEDRQLIT KTELQNRICV 
LLGGIAAEDI VFNENSTGGS NDLQRATDLA RRMVTEFGMS PKLGRVHYSD TSRSAFLANA 
ATVSESAHSE ETIREIDLEV RRIIDAAYET AHEILVTRRA AMDHLTRELL EIEVMDAEKL 
QQILSQYQTG PQIMPGTSAQ ISPNPTSLPT PAVAPYRPGE SDGSSEGGNP VNVG