Gene Plim_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0050 
Symbol 
ID9136703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp68055 
End bp69056 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628102 
Protein GI296120324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACAA ACTCAAAAAC TCAGGAAGTG AATTCGAGAG CCATGCACAG AATCCAGCGC 
TCACTGTTTT TCACCCCCTT GCTCCTGGGG CTAATTTCCC TCACAGGCTT TTCAAACGCT
GCCCAGGCAG AGACATCAAT TCAGGATGAA GCCAGTTTCT TTTCACCTGC TGCGAAAGAG
ACCGCCCTCA GCCGGCTGAA GGCCCTCGAA GCCAAGACGG GTCATGAAGT TCAGCTGCAG
ACGGTCGCAA CACTCCCAGA ACCGTGGAAA GGTCAACTCG CCAGCGGTCA GCCGAAGCAG
GGGGTGTTTG TCGATTTCAC CAAAGATCGC GGCCAACTGG CTAAGGCGAA AGGTCTGTTC
ATTCTCGTGG TGAAAGATCC GGCTCATCTC GAAGTGGCTG CTGATCGTCG GTTAAGAAAT
GCAGGGTTTA CGACCAGTCA GCGGAATGCT GTGGCCGAAA CTTTGCTCAA TGGCTTTCGA
GCGAAAGATT ATGACGACGG CCTGCTCGCC ACCGTCACTT TGATCGAGAA AGAGTTCGGA
ACTCTTCGTT CACCCTCGGC AGCACCAGTG CAGGCCAAAG AATCAGCGGC TGCCCCTGCC
AATACTTTAC CAGCTAAGCC AGCTGGTGAG GGTGATCTGG GTGGTTGGGG ATGGGTGCTC
GGGATCGGAG CCGTGGTGCT GATCGTCATG ATTGGGATGT CATTGCTGCG GGCTCTGTTT
GGTGGCGGAG CGGGTGCTGG TGCCGGGATG GGTGGAGGCG GTGGCATGGG CTTTGGCGGT
TCATTACTTA CGGGCCTGTT CGGTGCCATG GCTGGCCACT ACCTGTATGA CACATTTTTC
AACAACCATA GCCACGGCAG TGCCTTTGGT AATGATGCGA CCAGCGGCAT GGATGACCCG
AATCGCAACG ACTGGGGTTC GGGTGGCGAC TTCGGTGATT CCAGCGGCTT TAGTGGTGGT
GATTTTGGCG GCGGTGACTT CGGTGGCGGT GGTGATTTTT AG
 
Protein sequence
MPTNSKTQEV NSRAMHRIQR SLFFTPLLLG LISLTGFSNA AQAETSIQDE ASFFSPAAKE 
TALSRLKALE AKTGHEVQLQ TVATLPEPWK GQLASGQPKQ GVFVDFTKDR GQLAKAKGLF
ILVVKDPAHL EVAADRRLRN AGFTTSQRNA VAETLLNGFR AKDYDDGLLA TVTLIEKEFG
TLRSPSAAPV QAKESAAAPA NTLPAKPAGE GDLGGWGWVL GIGAVVLIVM IGMSLLRALF
GGGAGAGAGM GGGGGMGFGG SLLTGLFGAM AGHYLYDTFF NNHSHGSAFG NDATSGMDDP
NRNDWGSGGD FGDSSGFSGG DFGGGDFGGG GDF