Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0030 |
Symbol | |
ID | 9136683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 42475 |
End bp | 43188 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | protein of unknown function DUF164 |
Protein accession | YP_003628082 |
Protein GI | 296120304 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.372123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCGT CAGGCATGCA GCTTAAGGGA CTTCACACGA TTCATCTGGC ATTGCGTGAT GTGCAGGCCT TGATTGACCG TGGCCCGAAG CAGACTCTCG CCAAGAAACA GTTGATTCAG AAGCGGCAAG CCGATCATGA AGCTGCCAGA GATCGCCTGA AGCAAGCCCG TTTGCTGGCT GATCAGAAGA ATCTGCAGCT CAAGACCCAG GAAGCCCGGA TTGCCGAATA TCGGGCCAAG CAGAATACGG CGGCTTCAAA CCGCGAGTAC GACATTATCA AGGGGCAGAT CGCTGCTGAT GAGATGTCCA AAAGTGTGCT TGAAGATGAA ATTTTCGAAA CGCTTGAGCA GATCGATAAA TGTCAGCTTG AAATTGCTGA GCGTGAGAAA GAAGTCGCTG CTGCTCAGGC CGAACTGGTG CGGTATGAAG CCGAGTACGC CGCTGAGAAA CCTGGCCTCG AAGCGAGAAA AGCGACACTG GTTCAGCAAC TGGCCAGTGC TGAAGGTTGC CTGCCGGCGA ATATTATCCC GGATTACCGA CGACAGATTC AGGCCCATGG TGCGGATGCT TTGGCACCCG TTGAGAATCG TTCCTGCAGT GCCTGCTATC TGCAGCTGAC ACAGCAGCTC TTCATGGAAC TGCGTGCAGG GAAGCCCATG TTCTGCCGCT CCTGCGGACG ACTCATTTAT CTCGATGCTG AGGCAGACGA GTAA
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Protein sequence | MDSSGMQLKG LHTIHLALRD VQALIDRGPK QTLAKKQLIQ KRQADHEAAR DRLKQARLLA DQKNLQLKTQ EARIAEYRAK QNTAASNREY DIIKGQIAAD EMSKSVLEDE IFETLEQIDK CQLEIAEREK EVAAAQAELV RYEAEYAAEK PGLEARKATL VQQLASAEGC LPANIIPDYR RQIQAHGADA LAPVENRSCS ACYLQLTQQL FMELRAGKPM FCRSCGRLIY LDAEADE
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