Gene Plim_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0022 
Symbol 
ID9136675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp26666 
End bp27772 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628074 
Protein GI296120296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.860006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTATC ACTGGTTCTT TCTCTGCATG GTGATGGGCT TACTGGCAGG TTGCGGCGAA 
GCACCGGGAA TTCGCCAGTA CGAAGTGACC CGACCAGAAT TTGTCGAGCG GGGAAATGTG
GATGTTCCTC AGGCACCGCA GGTTGAACTT GAACCTGCGA CAACCTGGGG AGCTATTTGG
CCACGAGGGA ACCAGGCGTG GTTTTTCAAA GCGACAGCTT CTCCGGAAGC GGTCGCAGGG
TTGGCGACGA AATGGAAAGA GTTTGTCGCC AGCGTAAAGT TCAGCGATGG AAGCAATCCC
GAATGGACGC TTCCGGAAGG CTGGTCACAA CTCCCGGGGA ATCAGTTTCG ATTTGCCACA
CTCGTGATGA AAGATGCAGC GGGAGCCCCC ATCGAGTTGA CGGTTTCCTC ATTACCTCGA
TCTCCCGAAC AGTGGGACTC ACAGCTCGAT GCCAATCTTT CCCGATGGAA AGGTCAACTG
GGGATCGGGC CCATGGAGAG TTCTTCTGTT TCTCAGACGA CGGAAAAGCA GGGTGACGAT
GAGGTCGTGT TCGTGCTGAT GCAGGGCAGC AGGGCGAAAG GCCAGGGGAT GATGGGTGGT
ATGTCAGCTC CCGGGACTGC TTCAACTGCG AATATGCCTG CAGCAGAATC AGGCCAGACA
AAGCCACCGG CTGTCAATGA GATGCAGAAA ATGGTGGAAG GAGAGATCAA GCTCACTCCA
CCCGCAGAGT GGAAACCCGG GAAGTTAAAT GCCTTTCGCA AGGCGGCTTA TGAAGTGACG
CGAGGGGATG AGCGTGTCGA GATCACCGTC ATTGATCTGG CTGGCGAATC GGGCGGGTTG
CTGGAAAACA TCAACCGCTG GCGTGACCAG GTGGGAATGC CAGCGATTGA ACTTGCAGCC
CTCACTTCTG AACTGAAAAA CGTAAAGACA GCCAATGGCC CTGCGCAGCT CATTGAGATT
GAAGGTTCAA AAGGACAATC GATTCTGGGG GCTGTTTTGC CTCGTGGAGA TCGAACATGG
TTTGTCAAAC TTCAGGGGAG CACACCACTG GCCCAGCAGG AGAAGGCCAG GTTTCTGGAG
TTTCTGGAGA CCAGTGCCTT ACCTTAG
 
Protein sequence
MRYHWFFLCM VMGLLAGCGE APGIRQYEVT RPEFVERGNV DVPQAPQVEL EPATTWGAIW 
PRGNQAWFFK ATASPEAVAG LATKWKEFVA SVKFSDGSNP EWTLPEGWSQ LPGNQFRFAT
LVMKDAAGAP IELTVSSLPR SPEQWDSQLD ANLSRWKGQL GIGPMESSSV SQTTEKQGDD
EVVFVLMQGS RAKGQGMMGG MSAPGTASTA NMPAAESGQT KPPAVNEMQK MVEGEIKLTP
PAEWKPGKLN AFRKAAYEVT RGDERVEITV IDLAGESGGL LENINRWRDQ VGMPAIELAA
LTSELKNVKT ANGPAQLIEI EGSKGQSILG AVLPRGDRTW FVKLQGSTPL AQQEKARFLE
FLETSALP