| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0016 |
|---|
| Symbol | |
|---|
| ID | 9136669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 19592 |
|---|
| End bp | 21061 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003628068 |
|---|
| Protein GI | 296120290 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGTGGC AACTTCTTAA ACCACTTCTG GCAGTTCTTA TCACGGGATT TTTTCTCGCC
TCACTGACGA ATGCCTGGCT GGCGATTGCG ACTGCCAGAG CCAACGAATC GACCCGTATC
AACGAACTCA GTGCCAGTCT GCAAAGAGCG TCATTTCCAC TCAATGCCAG CGTCTTCAAA
CAATTGGAGG AACTGACTGG AGCCCGATTT GTCGCTTTAG CTGCTCCCTC GTCCTCACAA
AACTCGATCA CCTATCAAAG CTCACAACTT TCCCTCGAAA CCAGTCAATT GATGATGGCT
TCCTTTCCCT CAATTGGGAC TCCTTCGCGA CCCCAAAACA TCCATGCCGG AGGCGAAGAC
TGGCTCACCC GTACGATCGA GCGGTCTGTC GGCCTCCCTC AAGGCCCTGC CTCTCGGCTG
ATTATTCTTT TGCCGGTCGA GAGCTGGCAA AGTCTGTGGT GGCGAACTGC ACTCCCTCCT
GTGCTTGCTG GGACTTTGGC CGCCTTTGTC TGTGTGGTGA TTGTCATCTG GATCTCGAGG
CGACTCACTG GCCCGCTGTT GGACGTGGCC TCCCAAACAA CCCAGATCGC GCGGGGAAAT
TTATCATTAC TCCCAGTTCC CCGCCGCAAT GATGAAATCC GCGATCTCAT CGTCAATGTG
AACTCGATGT CCCAGGAGTT AGTACAACTG CATCAATCGA TTCGTCATGG CGAACAGCTC
AGAACATTAG GGCAACTGGG GGCAGGCTTT GCTCATCAGT TGCGAAATGC CGCTCTCGGG
GCTCGTATGG CTCTTGAATT CAGTGAGCGT GGCGATTCGT CATCCAGTGA TCATGAATCC
GTCCAGATTG CTCTGGCTCA GCTGCAGCGG ATGGAGTTGT ATCTGGATCG CTTTTTGAGA
CTCAGTCGGC CCGATCGAGT TCACTCCACA GACAAAAACT CGGGCCATGT TTCGCCCAGT
CAGACCATGA TCCGACTCAG TGGACTGGCA GACGGAGTCC TGCAACTCAT TGAACCTCTG
GCGAGACACC GGCACGTGGA GCTGCATAAA GACACTTCAA CATTCTGGGA AGTTGAAGTC
CGAGGTGATC TCGTCTCGCT CGAGCAAATG CTGTCGAATG TGGTGATCAA TGCTCTGGAA
GCCGCCAGTT CGCTGGAATT GACTTCAGAA GCGAGTGACC AGCTTCCTGC TTCATTAAAG
TTCAAACCCA CGGTGGTTCT CAAATGTCTG ACCACTGATC ACGAAGTGGA ACTTTCTGTC
TGTGATAATG GACCCGGGCC ACAGGCGAAT GTTCAGGAAA CACTCTTTCA ACCATTTGTC
ACCACACGTC CTGAAGGCTG CGGACTGGGC CTGTCTGTGG CTCAGGAAAT CGCGACGGGT
CATGGCGGTG AGATCACCTG GAATCGGCAA CAGGAACCCG ATGGCACCAT GTGGACCATC
TTTCGCATTC GCCTCAAGAA GCAAAGATAA
|
|---|
| Protein sequence | MQWQLLKPLL AVLITGFFLA SLTNAWLAIA TARANESTRI NELSASLQRA SFPLNASVFK
QLEELTGARF VALAAPSSSQ NSITYQSSQL SLETSQLMMA SFPSIGTPSR PQNIHAGGED
WLTRTIERSV GLPQGPASRL IILLPVESWQ SLWWRTALPP VLAGTLAAFV CVVIVIWISR
RLTGPLLDVA SQTTQIARGN LSLLPVPRRN DEIRDLIVNV NSMSQELVQL HQSIRHGEQL
RTLGQLGAGF AHQLRNAALG ARMALEFSER GDSSSSDHES VQIALAQLQR MELYLDRFLR
LSRPDRVHST DKNSGHVSPS QTMIRLSGLA DGVLQLIEPL ARHRHVELHK DTSTFWEVEV
RGDLVSLEQM LSNVVINALE AASSLELTSE ASDQLPASLK FKPTVVLKCL TTDHEVELSV
CDNGPGPQAN VQETLFQPFV TTRPEGCGLG LSVAQEIATG HGGEITWNRQ QEPDGTMWTI
FRIRLKKQR
|
|---|
| |