Gene Plim_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0010 
Symbol 
ID9136663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp11910 
End bp13304 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628062 
Protein GI296120284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.921965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTTT CCCAACCATG GATGGCAATC ACCTCAGCCA TGGCTCAGCA TTGGGTTGAC 
CTCTGCATGG GCCGATGGGC AGCCAGCCTG TTGGCGGCCA GCCTGTCGGG TGCGATCGTC
TTCCAGCAGC TTCCCGGTCT GTGTGCTCAG GAGCAGATTC CGAGTCACGA GCCTCCCGTC
TCGGCATTAA GTATCGAGAA CAACAGCTCA GCACCCCGTC GTCTCATGGG CCACGAATCG
TTGATTCCCC AGCCGGCAAC AATCATCACC GCCTCGGGTG CAGCGCCGAC GACTCCCGCA
AAAACCCGCC ATTACATCTT TCAGGTCCAG GTCATTGAGG TGGATGAGCA GGGCGTACAA
ACTGTTGTGG CGACGCCCCG CATTCAAACA ACAGGAACCC CCTCTGGCTT TGTCACCGAG
AAGCCCGATG GCCAACGCTT TGAGTTCACT GTCGCGGTTT CCAACTCATT CAATCGCCCC
GCTGAAGTTT CGACATTGCC AGCCGCCATA CCACCTGCAG TAACTGCTGC ACCTGCGGGA
ACCGCTCAGG CTCCCCGATC GCTGGGTGGG ACGGCTGAGC AATACGCCGC CATGCCTCAA
ATTGGTGGTG CCCCGACTCT TGATGCCAAT ACCAGTCTCG AAACAGAACG TAATCAGGCC
AAAAATCTCG CGTTTCCCGA TCTCTCTGAT CTGCCACCTT CTCCGGCCAC CGCTGCCAAT
AGTCGCCCCA GGGCTTTCAT TCCCAATGAT CAGGTGGCAC CACTGGCTTC GACCTCACTA
ACTTCCAACA ACGCGATGGG AAGTTCCGCC TCCAGCGTGA ATTCGGGCAG TCGTGCTCCA
GCGGGCCAAA CCGAACCGGT GATCACTTCC GAAACAGTTC TTGATCGCCT GTCGAAAAAG
ATCACTGTCA GCCTTACCAA CGAAACCCGC CGCTCGGCTC TCCGCAAAGT GGCTGAAGAA
GCCGGAGTGA ATATTGTCAT CGACCCTGCG GCACTGGTTT CTTCCCGGCC AAAGCTTGAC
GACACCGTCA CGTTGAACAT TGCCAATCAA CCCGCCGATG AAGTGATCGA ACAACTTGTC
GCAGCGGCTG AACTGGCCTA CGCCGTCAAA CATGAAATCG TGTTGATCGG CCATGCAGAG
CAACTCCGGC CAAAACCTGA AGATTACTTC GTGAAGACCT ATCCCGCGGG AGAGCTTGCT
CCGCTGGTGA ATGGCCAACC CGATTTCGAT GCACTGGTCA GTGAGATTCA GGCCAGTGTC
CAGCCGAAAT CATGGAAAGG CCCCAACAGT GGCAGTATCC GTGTGTTTCA ATCAACCGGA
GCACTCGTCG TTCGACAGAC AGAAGCGGGC CATTACGCAC TCGAGAAATA CTTAAAGAAA
CGGGCGATTC GCTGA
 
Protein sequence
MGVSQPWMAI TSAMAQHWVD LCMGRWAASL LAASLSGAIV FQQLPGLCAQ EQIPSHEPPV 
SALSIENNSS APRRLMGHES LIPQPATIIT ASGAAPTTPA KTRHYIFQVQ VIEVDEQGVQ
TVVATPRIQT TGTPSGFVTE KPDGQRFEFT VAVSNSFNRP AEVSTLPAAI PPAVTAAPAG
TAQAPRSLGG TAEQYAAMPQ IGGAPTLDAN TSLETERNQA KNLAFPDLSD LPPSPATAAN
SRPRAFIPND QVAPLASTSL TSNNAMGSSA SSVNSGSRAP AGQTEPVITS ETVLDRLSKK
ITVSLTNETR RSALRKVAEE AGVNIVIDPA ALVSSRPKLD DTVTLNIANQ PADEVIEQLV
AAAELAYAVK HEIVLIGHAE QLRPKPEDYF VKTYPAGELA PLVNGQPDFD ALVSEIQASV
QPKSWKGPNS GSIRVFQSTG ALVVRQTEAG HYALEKYLKK RAIR