| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0009 |
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| Symbol | |
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| ID | 9136662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 10824 |
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| End bp | 11840 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | D-alanine/D-alanine ligase |
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| Protein accession | YP_003628061 |
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| Protein GI | 296120283 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.542001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACGCG GGAACATACA GTCTGCTGCC ACCAATCCAC CGCGATGGAA CATTGCCTTG
CTGGCCGGTG GTGATTCTGA CGAGCGGTCA ATCAGTCTCA GAAGTGGCCA GGCCGTTTGT
CAGGCTTTGC AGGAGCGTGG CCATTTCATA CTGCCGATCG ACCCCGCCAT CGTTTCACTC
AAGGGAATGG ATTGGAATGG GTTTGATGCA GTCTTTATCG CCCTGCATGG ACGGTTTGGC
GAAGACGGCG GTGTGCAGAC ATTGCTCGAA GAATCCGGAA TTCCTTACAC GGGGAGCAGC
AGTCAGGCTT CCCGTTTAGC GTTTGATAAA CGCATTGCCA AACAGAATTT TGATCGCATG
CAGGTGCCGA CTCCCGCATG GTGCGAACTT TCACCTCACG AGTCTTTCGA CAGTTTGCTG
ATGAAAGCAA AGGAACTGGG CTGGCCTGTG GTCATTAAAC CCGCATCGCA AGGCTCGAGC
CTGGGCGTCT CGATTGTCCG CCAGCCAGAG CAACTTCAAT CCGCTTATGA AAGGGCACGC
CATTACGACG AGGCCCTCAT TATGGAAGCG GCAATTGTGG GCAGCGAATG GACTGTCGGA
CTGCATGACG ACGAGATCTT GCCACCGATC TGTATCGAGA CAGACCGCGA GTTTTTCGAC
TGGGTCGCGA AATACGAAGA CGACCACACA CGTTACATCT TCGATAAACC TCTCCCGGCA
ACATGCCGAC AGAAGCTGGA AACTGCCTGC CGGGGAGCCG TCCATGCTCT GGGTGTGACT
GGAATCTCCC GGGTCGATCT GATGCTCGAT TCGGAAGGGA ACCCCTGGGT TCTTGAAATC
AACACCATTC CCGGATTAAC CGATCACAGC CTCGTCCCCA AGGCGGCTCA GCAAGCCGGT
TGGTCTTTGG GAGAATTGTG CGAAGAGTCG ATTCACCGCG CCATCCAAAG ACGCCCCCGC
AGACCGCACT TACTCAGACG TGCTTCGTTT TCGACACAGG CTCGGCAAAG GCCTTAA
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| Protein sequence | MSRGNIQSAA TNPPRWNIAL LAGGDSDERS ISLRSGQAVC QALQERGHFI LPIDPAIVSL
KGMDWNGFDA VFIALHGRFG EDGGVQTLLE ESGIPYTGSS SQASRLAFDK RIAKQNFDRM
QVPTPAWCEL SPHESFDSLL MKAKELGWPV VIKPASQGSS LGVSIVRQPE QLQSAYERAR
HYDEALIMEA AIVGSEWTVG LHDDEILPPI CIETDREFFD WVAKYEDDHT RYIFDKPLPA
TCRQKLETAC RGAVHALGVT GISRVDLMLD SEGNPWVLEI NTIPGLTDHS LVPKAAQQAG
WSLGELCEES IHRAIQRRPR RPHLLRRASF STQARQRP
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