| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0008 |
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| Symbol | |
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| ID | 9136661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 9261 |
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| End bp | 10766 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003628060 |
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| Protein GI | 296120282 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.273138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAGCCG TCTGCTCAGG AGATGAGAAA CTGGACGAAA AAGCGGACAT GCCTGAACCA
GAAAATCTGA AAATCGATCT ACACGATCAA TCTGGTGTGG AACTGGTCAA ACTTTGGGCT
TCAGGGAATC AAGACGCTGC GCAAATACTG GTTGCGCGGT ATCAGATTCG ACTTATGGCC
ATGATCAGTG CTCGCTTATC GGCGCAGTAT CGCCATCGAA TCGCGACAGA AGATGTTGTG
CAGTCAGCAC TGGTGAGTTT CTTCCGTACG GCTCGCCATC AAACAGAACG TTCAGTCATT
CCGACATCAA CGAAATCTGT CTGGGATCTT CTCGCTCTCT TCGCCCGCCG CAAGTTATCC
CGAGCGATCG AACGAGAAAG CGCCAGCAAA AGAGGTGGTC ACTGGAAGCG ATACTCATTA
GAGCAGTTCG AACACAGTTT CCCAGTTTCG CCCGGTTCTC AGGAACTTGA GGAACTGCTG
ATTGATCTCC GCTCACAGTT GGACGATAGC CAATCACAGC TTCTTGAACT TCTCCTGCAA
AATGCGACTC AGAAAGAAAT TGCACAGCAA TGCGCTGTCG ATGAGAGGAC CATTCGCCGG
CGCTTAATGG CTTTGCGGAA CCTGATCGCC GAACAGTGGG CAGGTGAGTT TTCATTCCCC
ACCAAAGAAC TACGATTCAG TCCAACGATT TCGCTACCTC AGATCACCTA TGGACAATTT
GTACTTGGAA AGCTGGTCGG GAGAGGGGCT CTTGGAAAAG TTTATCGAGC CAGATGGCAG
CCACACGGTC AATTGATGGC TGTGAAATTC ATGCACCGCG ATCTATGGAA ACAACCTGAG
TCGCAGGATT CCTTTCTCCG GGAAATTGAT CTCGCTTCAA AGATTCATCA TCCGGGCATC
ATCAGATATC TTGGCTGGGG AAGGTCTCCT CACGGCGGGC CCTATCTTTT AAGCGAATAC
ATTGATGGTT CCGCATTGAC GAAGTGCTCA ATCGCTGATG CTCCAACTCG ATGGAAGCGG
TTCATTGACA TTTGCGACGC AATGGCAGCA GCTCATCAGT CAGGTGTCAT TCATGGTGAT
CTCACACCCG CCAACATCCT GATTGCGCAT GATGGTCGTG TCGTTGTCAC TGATTTCGGG
TTTGCCACGC AAAGCTATTC AAAAACAGAG AACGATCACG CAGACTTAAA CTTCATCTCG
CCCGGCGGAA CAATTGGTTT TGCTGCACCT GAGCAGATTT CGACCGCCTT TGGAAACATC
AGCCCAGCGA CAGACATCTA TGCCCTCGGG GCTCTCGCGT TCTATCTACT TTTTGGCAGG
GGGCCACACC AGAAAATCGA GCAATCGATT GTCGATACGC TTGATGAAGA AAATGTCGTC
ATTAAGGAAA CACAAACCAC TGCCGAAGAA ACCAGGTTGG CGAAAGTCGT CAACCGAGCA
CTCAAGAAAG CCGTCAGGGA TCGCCCTCAG TCGATTGCTG AACTCCTCGA TGGCATGAGA
GGTTAG
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| Protein sequence | MEAVCSGDEK LDEKADMPEP ENLKIDLHDQ SGVELVKLWA SGNQDAAQIL VARYQIRLMA
MISARLSAQY RHRIATEDVV QSALVSFFRT ARHQTERSVI PTSTKSVWDL LALFARRKLS
RAIERESASK RGGHWKRYSL EQFEHSFPVS PGSQELEELL IDLRSQLDDS QSQLLELLLQ
NATQKEIAQQ CAVDERTIRR RLMALRNLIA EQWAGEFSFP TKELRFSPTI SLPQITYGQF
VLGKLVGRGA LGKVYRARWQ PHGQLMAVKF MHRDLWKQPE SQDSFLREID LASKIHHPGI
IRYLGWGRSP HGGPYLLSEY IDGSALTKCS IADAPTRWKR FIDICDAMAA AHQSGVIHGD
LTPANILIAH DGRVVVTDFG FATQSYSKTE NDHADLNFIS PGGTIGFAAP EQISTAFGNI
SPATDIYALG ALAFYLLFGR GPHQKIEQSI VDTLDEENVV IKETQTTAEE TRLAKVVNRA
LKKAVRDRPQ SIAELLDGMR G
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