Gene Ava_D0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_D0040 
Symbol 
ID8952427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_014000 
Strand
Start bp28745 
End bp29164 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003541163 
Protein GI292905292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000112335 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGAC TCTACCGAGT ATTCAGCATG AACAATGACC AATTTCAACT CTTCATGACC 
GTCTTACTCC GCATCGCCGA TGCCCTAGAA CGCATTGCCC CAGCCACCCC CAAGGCTCCC
AACTACCAAT ACCCAATCGA ACAGTTTCTT ACTTTTGACT GGGAATCTAT AGGGGCAGTA
GTCGAAAAAC ACGACCAATA CGGCGCGGCT GTAGTCTCCT GGGGTGGACG CTCCTTCTTA
CGGCGTTCAC CCGCTAATAA ATACAGTGCA GCCATCTGGT TTAGTTGCGC CGTTGGCAAG
GATGGCGAGA ACACTATCTA TGAACGCCTG ATCACTTTCA AGCCGAGAAA CAGCAACGCC
GAACCTATAC CCGAAAAAGT CACCAATTTA ATTAGTTATC CACAGGGTAA AGAAGCATGA
 
Protein sequence
MKGLYRVFSM NNDQFQLFMT VLLRIADALE RIAPATPKAP NYQYPIEQFL TFDWESIGAV 
VEKHDQYGAA VVSWGGRSFL RRSPANKYSA AIWFSCAVGK DGENTIYERL ITFKPRNSNA
EPIPEKVTNL ISYPQGKEA