Gene Ava_D0038 details

Gene Information

• Locus tag: Ava_D0038
• ID: 8952425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_014000
• Strand: +
• Start bp: 27344
• End bp: 27898
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 50%
• Product: hypothetical protein
• Protein accession: YP_003541161
• Protein GI: 292905290

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0411256
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATATA CAGACACAAA AAGCCAAGCC AAAAAGCGCT ACACCCTCCG CGAAGTCCAA 
GCAATAGCCA AAACCTACGA CCTACTTATT CAACCAATCA ACGCCAACTC CCGCGCACCC 
TACGGTATCT TCTTCGACGG TCAACTAGTA GCCGAAGTTA AAAAGCTGAC AGATGCGATC 
GCAATCTTCC CCAATCTCTA CACCGCAATC CAAGAGCAAC TGGCAGAACA AGCAGCAGCC 
CAACAAACAA CCGAAGTCAA CAACAGCCAA CCCGTAACAC TACCCACCGT TGGCGAATCC 
TACCAAATCG GCGGCTTGAC CATCAAATGC GCCCAAATCG GAGGTGAGGT TGCGGTCACC 
TGGGAAGTGT TCGACGGTGG AACCCTCGTA GGAACAATCA GCATGAAGTG GGACACCTTC 
TGGATAATTT CAATCCCTGA TAGGGATTAC TCAAATATCC CACCGAGTAA ATGTTCTCAC 
ACAATTGTCT ACGCCACACC CCAAGAAGCC ACCTACGCCT TACTAGAGTC TCGTTCACTG 
GCGCTCATCA CCTAA 

 

Protein sequence

MTYTDTKSQA KKRYTLREVQ AIAKTYDLLI QPINANSRAP YGIFFDGQLV AEVKKLTDAI 
AIFPNLYTAI QEQLAEQAAA QQTTEVNNSQ PVTLPTVGES YQIGGLTIKC AQIGGEVAVT 
WEVFDGGTLV GTISMKWDTF WIISIPDRDY SNIPPSKCSH TIVYATPQEA TYALLESRSL 
ALIT